RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	CA5B	Q9Y2D0	317 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	FNDC3A	Q9Y2H6	1198 aa	Known RBP	17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	PCDHA13	Q9Y5I0	950 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	SNX11	Q9Y5W9	270 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	ARID1B	Q8NFD5	2236 aa	Predicted RBP	17.55	■□□□□ 0.4
MBD1-221	ENST00000589867		A0A1W2PQU0	124 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	MFSD11	O43934	449 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	RNGTT	O60942	597 aa	Known RBP	17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	PIGN	O95427	931 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	SYP	P08247	313 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	ITIH2	P19823	946 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	ARHGAP25	P42331	645 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	CTSK	P43235	329 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	NEK3	P51956	506 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	SLC10A7	Q0GE19	358 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	KRT81	Q14533	505 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	PAFAH1B3	Q15102	231 aa	Known RBP	17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	UAP1L1	Q3KQV9	507 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	ANKRD20A8P	Q5CZ79	823 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	ERMP1	Q7Z2K6	904 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	ZSWIM9	Q86XI8	627 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	PGBD5	Q8N414	524 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	RYBP	Q8N488	228 aa	Predicted RBP	17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	KLK6	Q92876	244 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	ZNF670	Q9BS34	389 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	CPEB1	Q9BZB8	566 aa	Known RBP	17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	ZDHHC5	Q9C0B5	715 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	GOLPH3	Q9H4A6	298 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	ITM2B	Q9Y287	266 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	ANKRD6	Q9Y2G4	727 aa		17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	EPN1	Q9Y6I3	576 aa	Predicted RBP	17.54	■□□□□ 0.4
MBD1-221	ENST00000589867	KCNK3	O14649	394 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	GIPC1	O14908	333 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	AREL1	O15033	823 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	VILL	O15195	856 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	AP1G1	O43747	822 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	IGSF6	O95976	241 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	TIMP2	P16035	220 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	CR2	P20023	1033 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	KDELR1	P24390	212 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	CDC25B	P30305	580 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	SLC10A2	Q12908	348 aa	Predicted RBP	17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	PDK2	Q15119	407 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	HLA-B	Q31612	363 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	NEK5	Q6P3R8	708 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	GDPD4	Q6W3E5	623 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	HORMAD1	Q86X24	394 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	TMEM145	Q8NBT3	493 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	PPP1R16A	Q96I34	528 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	SP110	Q9HB58	689 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	DYRK4	Q9NR20	520 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	LCMT1	Q9UIC8	334 aa		17.53	■□□□□ 0.4
MBD1-221	ENST00000589867	TSPAN11	A1L157	253 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	TTC24	A2A3L6	582 aa	Predicted RBP	17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	UPK3BL1	B0FP48	263 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	UPK3BL2	E5RIL1	263 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	PALM	O75781	387 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	KCNK5	O95279	499 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	NDUFA10	O95299	355 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	MAP3K6	O95382	1288 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	KRT7	P08729	469 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	PRLR	P16471	622 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	COMT	P21964	271 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	CSNK1D	P48730	415 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	GALNT2	Q10471	571 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	SHB	Q15464	509 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	PPM1J	Q5JR12	505 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	LRRC73	Q5JTD7	316 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	NAPEPLD	Q6IQ20	393 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	PRPF39	Q86UA1	669 aa	Known RBP	17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	SPATS2	Q86XZ4	545 aa	Known RBP	17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	KCTD6	Q8NC69	237 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	LRRN4	Q8WUT4	740 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	SERAC1	Q96JX3	654 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	PSKH2	Q96QS6	385 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	CALN1	Q9BXU9	219 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	OSBPL1A	Q9BXW6	950 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	DKK3	Q9UBP4	350 aa		17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	TPX2	Q9ULW0	747 aa	Known RBP	17.52	■□□□□ 0.4
MBD1-221	ENST00000589867	RAD51B	O15315	384 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	SLC31A1	O15431	190 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	OPHN1	O60890	802 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	CD38	P28907	300 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	GBE1	Q04446	702 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	NSUN2	Q08J23	767 aa	Known RBP eCLIP	17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	IHH	Q14623	411 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	RFTN1	Q14699	578 aa	Predicted RBP	17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	LBR	Q14739	615 aa	Known RBP	17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	ZNF423	Q2M1K9	1284 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	TMCO4	Q5TGY1	634 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	LRRC38	Q5VT99	294 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	FBXL19	Q6PCT2	694 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	DBX2	Q6ZNG2	339 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	SRL	Q86TD4	932 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	CAMK1D	Q8IU85	385 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	TMTC1	Q8IUR5	882 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	ZNF599	Q96NL3	588 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	RNF157	Q96PX1	679 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	LACRT	Q9GZZ8	138 aa		17.51	■□□□□ 0.39
MBD1-221	ENST00000589867	SUV39H2	Q9H5I1	410 aa		17.51	■□□□□ 0.39

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