RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 RNGTTO60942 597 aaKnown RBP16.64■□□□□ 0.25
DNMT1-221ENST00000589538 MX2P20592 715 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 KDELR1P24390 212 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 SUOXP51687 545 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 GSDMDP57764 484 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 GRIK2Q13002 908 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 ZNF235Q14590 738 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 LBRQ14739 615 aaKnown RBP16.64■□□□□ 0.25
DNMT1-221ENST00000589538 KIAA1161Q6NSJ0 714 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 PARS2Q7L3T8 475 aaKnown RBP16.64■□□□□ 0.25
DNMT1-221ENST00000589538 ERMP1Q7Z2K6 904 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 DGLUCYQ7Z3D6 616 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 HORMAD1Q86X24 394 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 CPNE8Q86YQ8 564 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 MINDY1Q8N5J2 469 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 PCDH19Q8TAB3 1148 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 SERAC1Q96JX3 654 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 ZNF641Q96N77 438 aaPredicted RBP16.64■□□□□ 0.25
DNMT1-221ENST00000589538 KLHL32Q96NJ5 620 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 ORAI3Q9BRQ5 295 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 DNAAF2Q9NVR5 837 aaKnown RBP16.64■□□□□ 0.25
DNMT1-221ENST00000589538 LAMA1P25391 3075 aa16.64■□□□□ 0.25
DNMT1-221ENST00000589538 ADAMTS9Q9P2N4 1935 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 LRRD1A4D1F6 860 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 BTNL10A8MVZ5 291 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 VILLO15195 856 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 PSTPIP1O43586 416 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 TSPAN6O43657 245 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 DFNA5O60443 496 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 BUB1BO60566 1050 aaPredicted RBP16.63■□□□□ 0.25
DNMT1-221ENST00000589538 MAFKO60675 156 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 MAGEC1O60732 1142 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 PCDH8O95206 1070 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 ZFXP17010 805 aaPredicted RBP16.63■□□□□ 0.25
DNMT1-221ENST00000589538 COMTP21964 271 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 CD38P28907 300 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 GKP32189 559 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 CSNK1EP49674 416 aaKnown RBP16.63■□□□□ 0.25
DNMT1-221ENST00000589538 C21orf59P57076 290 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 PPP2CBP62714 309 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 RPS21P63220 83 aaKnown RBP16.63■□□□□ 0.25
DNMT1-221ENST00000589538 PPP2CAP67775 309 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 SLC14A1Q13336 389 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 CFAP58Q5T655 872 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 NCBP2-AS2Q69YL0 99 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 NAPEPLDQ6IQ20 393 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 TIGD7Q6NT04 549 aaPredicted RBP16.63■□□□□ 0.25
DNMT1-221ENST00000589538 C11orf63Q6NUN7 778 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 ARHGAP36Q6ZRI8 547 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 SRLQ86TD4 932 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 SPC24Q8NBT2 197 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 TSEN2Q8NCE0 465 aaKnown RBP16.63■□□□□ 0.25
DNMT1-221ENST00000589538 ZNF830Q96NB3 372 aaPredicted RBP16.63■□□□□ 0.25
DNMT1-221ENST00000589538 RNF157Q96PX1 679 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 PSKH2Q96QS6 385 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 MAK16Q9BXY0 300 aaKnown RBP16.63■□□□□ 0.25
DNMT1-221ENST00000589538 ATP13A3Q9H7F0 1226 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 AASDHPPTQ9NRN7 309 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 KLHL11Q9NVR0 708 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 ANKRD6Q9Y2G4 727 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.63■□□□□ 0.25
DNMT1-221ENST00000589538 FADS3Q9Y5Q0 445 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 ALG6Q9Y672 507 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 PLXNA2O75051 1894 aa16.63■□□□□ 0.25
DNMT1-221ENST00000589538 A0A1B0GVT2 93 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 A0A1W2PQU0 124 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 UPK3BL1B0FP48 263 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 UPK3BL2E5RIL1 263 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 PRAMEF26H0Y7S4 382 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 NEMP1O14524 444 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 TM4SF5O14894 197 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 KRT1P04264 644 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 XPAP23025 273 aaPredicted RBP16.62■□□□□ 0.25
DNMT1-221ENST00000589538 SERPINA4P29622 427 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 AP1S1P61966 158 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 GALNT2Q10471 571 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 OVGP1Q12889 678 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 IFI16Q16666 785 aaKnown RBP16.62■□□□□ 0.25
DNMT1-221ENST00000589538 RALGPS1Q5JS13 557 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 MARC1Q5VT66 337 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 BRAT1Q6PJG6 821 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 RAD9BQ6WBX8 426 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 TTC7BQ86TV6 843 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 IQCHQ86VS3 1027 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 TP53INP2Q8IXH6 220 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 NETO2Q8NC67 525 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 FAM174AQ8TBP5 190 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.62■□□□□ 0.25
DNMT1-221ENST00000589538 RAPGEF5Q92565 580 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 FATE1Q969F0 183 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 EXOC2Q96KP1 924 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 SUV39H2Q9H5I1 410 aa16.62■□□□□ 0.25
DNMT1-221ENST00000589538 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.61■□□□□ 0.25
DNMT1-221ENST00000589538 A0A1W2PQ67 120 aa16.61■□□□□ 0.25
DNMT1-221ENST00000589538 RNF103O00237 685 aa16.61■□□□□ 0.25
DNMT1-221ENST00000589538 MFSD11O43934 449 aa16.61■□□□□ 0.25
DNMT1-221ENST00000589538 ZNF883P0CG24 379 aa16.61■□□□□ 0.25
DNMT1-221ENST00000589538 HNRNPA2B1P22626 353 aaKnown RBP16.61■□□□□ 0.25
DNMT1-221ENST00000589538 CCNCP24863 283 aa16.61■□□□□ 0.25
DNMT1-221ENST00000589538 MAT2AP31153 395 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms