RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 UBOX5O94941 541 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 GJB5O95377 273 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 OLFM2O95897 454 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 F11P03951 625 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 C2P06681 752 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 MBL2P11226 248 aaPredicted RBP10.5□□□□□ -0.73
VPS25-203ENST00000589520 CPA3P15088 417 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 CORO1AP31146 461 aaKnown RBP10.5□□□□□ -0.73
VPS25-203ENST00000589520 SLC6A4P31645 630 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 SLC26A3P40879 764 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 CD151P48509 253 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 CSRP3P50461 194 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 HK2P52789 917 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 OCRLQ01968 901 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 BST1Q10588 318 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 PPIGQ13427 754 aaKnown RBP eCLIP10.5□□□□□ -0.732e-6■□□□□ 10.9
VPS25-203ENST00000589520 OLIG2Q13516 323 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 POU6F1Q14863 301 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 CHI3L2Q15782 390 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 LRRC26Q2I0M4 334 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 TSNAXIP1Q2TAA8 658 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 FASTKD1Q53R41 847 aaKnown RBP10.5□□□□□ -0.73
VPS25-203ENST00000589520 INO80DQ53TQ3 878 aaPredicted RBP10.5□□□□□ -0.73
VPS25-203ENST00000589520 FAM91A1Q658Y4 838 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 IL31Q6EBC2 164 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 CLEC14AQ86T13 490 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 ZC3HC1Q86WB0 502 aaKnown RBP10.5□□□□□ -0.73
VPS25-203ENST00000589520 WDR75Q8IWA0 830 aaKnown RBP10.5□□□□□ -0.73
VPS25-203ENST00000589520 ELMOD1Q8N336 334 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 FIBCD1Q8N539 461 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 FITM2Q8N6M3 262 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 HJURPQ8NCD3 748 aaPredicted RBP10.5□□□□□ -0.73
VPS25-203ENST00000589520 BRSK1Q8TDC3 778 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 AGAP2Q99490 1192 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 TMEM106CQ9BVX2 250 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 CINPQ9BW66 212 aaPredicted RBP10.5□□□□□ -0.73
VPS25-203ENST00000589520 WWP1Q9H0M0 922 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 ZBP1Q9H171 429 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 MFSD1Q9H3U5 465 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 ABCF3Q9NUQ8 709 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 COPG2Q9UBF2 871 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 LSM7Q9UK45 103 aaKnown RBP10.5□□□□□ -0.73
VPS25-203ENST00000589520 AGO1Q9UL18 857 aaKnown RBP10.5□□□□□ -0.73
VPS25-203ENST00000589520 LZTS1Q9Y250 596 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 PSAT1Q9Y617 370 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 MYO16Q9Y6X6 1858 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 TRIM43BA6NCK2 446 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 MROH6A6NGR9 719 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 H3BNC9 293 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 PFDN6O15212 129 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 CCDC22O60826 627 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 UNC5CO95185 931 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 VAPBO95292 243 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 CRTAMO95727 393 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 NDST3O95803 873 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 FGBP02675 491 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 AHSGP02765 367 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 PROCP04070 461 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 ADH1AP07327 375 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 MMP2P08253 660 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 CSF2RAP15509 400 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 CDC25CP30307 473 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 LEPRP48357 1165 aaKnown RBP10.49□□□□□ -0.73
VPS25-203ENST00000589520 CLCN5P51795 746 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 SLC12A2P55011 1212 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 RAB10P61026 200 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 DEFB103AP81534 67 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 HTRA4P83105 476 aaPredicted RBP10.49□□□□□ -0.73
VPS25-203ENST00000589520 DSC2Q02487 901 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 ACVR1Q04771 509 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 MSLNQ13421 630 aaPredicted RBP10.49□□□□□ -0.73
VPS25-203ENST00000589520 USP10Q14694 798 aaKnown RBP10.49□□□□□ -0.73
VPS25-203ENST00000589520 TBCCQ15814 346 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 CNGA3Q16281 694 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 MPP7Q5T2T1 576 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 ESRP1Q6NXG1 681 aaKnown RBP10.49□□□□□ -0.73
VPS25-203ENST00000589520 RAPH1Q70E73 1250 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 FAM217AQ8IXS0 508 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 KIRREL3Q8IZU9 778 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 SLC25A41Q8N5S1 370 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 PHOSPHO2Q8TCD6 241 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 DIS3LQ8TF46 1054 aaKnown RBP10.49□□□□□ -0.73
VPS25-203ENST00000589520 STYXQ8WUJ0 223 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 MRPS31Q92665 395 aaKnown RBP10.49□□□□□ -0.73
VPS25-203ENST00000589520 INPP5DQ92835 1189 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 TRIM43Q96BQ3 446 aaPredicted RBP10.49□□□□□ -0.73
VPS25-203ENST00000589520 KLHL5Q96PQ7 755 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 TMEM237Q96Q45 408 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 RAB3IPQ96QF0 476 aaPredicted RBP10.49□□□□□ -0.73
VPS25-203ENST00000589520 SEMA3CQ99985 751 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 C19orf43Q9BQ61 176 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 EMILIN2Q9BXX0 1053 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 ECT2Q9H8V3 914 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 NMRAL1Q9HBL8 299 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 NPHS2Q9NP85 383 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 ZMYM5Q9UJ78 669 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 ZFP69BQ9UJL9 534 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 FBXO5Q9UKT4 447 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 ACOT9Q9Y305 439 aa10.49□□□□□ -0.73
VPS25-203ENST00000589520 RWDD3Q9Y3V2 267 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms