RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 PIP4K2CQ8TBX8 421 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 NELL1Q92832 810 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 ZNF641Q96N77 438 aaPredicted RBP19.83■□□□□ 0.77
CIRBP-220ENST00000588917 OMDQ99983 421 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 ZDHHC6Q9H6R6 413 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 ATP13A3Q9H7F0 1226 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 SCUBE2Q9NQ36 999 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 ZSCAN32Q9NX65 697 aa19.83■□□□□ 0.77
CIRBP-220ENST00000588917 EVLQ9UI08 416 aaPredicted RBP19.83■□□□□ 0.77
CIRBP-220ENST00000588917 DRG1Q9Y295 367 aaKnown RBP19.83■□□□□ 0.77
CIRBP-220ENST00000588917 A0A1W2PQ67 120 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 LEFTY1O75610 366 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 RBL1P28749 1068 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 SERPINA4P29622 427 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 PAFAH1B1P43034 410 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 BCL2L1Q07817 233 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 C11orf74Q86VG3 221 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 ZSCAN30Q86W11 494 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 CHST14Q8NCH0 376 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 COG1Q8WTW3 980 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 LRRN4Q8WUT4 740 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 ERLEC1Q96DZ1 483 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 EXOC2Q96KP1 924 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 TEKT5Q96M29 485 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 PABPC3Q9H361 631 aaKnown RBP19.82■□□□□ 0.76
CIRBP-220ENST00000588917 ZNF148Q9UQR1 794 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 WASF2Q9Y6W5 498 aa19.82■□□□□ 0.76
CIRBP-220ENST00000588917 GOLGA6L10A0A0M3HER8 536 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 KPNA3O00505 521 aaPredicted RBP19.81■□□□□ 0.76
CIRBP-220ENST00000588917 INSIG1O15503 277 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 KCNN4O15554 427 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 LIASO43766 372 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 CR2P20023 1033 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 PSMD8P48556 350 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 PXNP49023 591 aaPredicted RBP19.81■□□□□ 0.76
CIRBP-220ENST00000588917 FNTBP49356 437 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 POLR2LP62875 67 aaKnown RBP19.81■□□□□ 0.76
CIRBP-220ENST00000588917 LMNB2Q03252 620 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 ALG1LQ6GMV1 187 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 PID1Q7Z2X4 250 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 PGBD5Q8N414 524 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 GANCQ8TET4 914 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 MS4A14Q96JA4 679 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 SPACA7Q96KW9 195 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 C16orf45Q96MC5 204 aaPredicted RBP19.81■□□□□ 0.76
CIRBP-220ENST00000588917 AGAP3Q96P47 875 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 SUV39H2Q9H5I1 410 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 FEZ2Q9UHY8 353 aaPredicted RBP19.81■□□□□ 0.76
CIRBP-220ENST00000588917 DNPEPQ9ULA0 475 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 R3HDM2Q9Y2K5 976 aaKnown RBP19.81■□□□□ 0.76
CIRBP-220ENST00000588917 TTLL3Q9Y4R7 772 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 PCDHGA2Q9Y5H1 932 aa19.81■□□□□ 0.76
CIRBP-220ENST00000588917 NYNRINQ9P2P1 1898 aaKnown RBP19.81■□□□□ 0.76
CIRBP-220ENST00000588917 ATG2BQ96BY7 2078 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 MUSKO15146 869 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 MID1O15344 667 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 IGLV3-19P01714 112 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 ITGAVP06756 1048 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 SERPINF2P08697 491 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 CA4P22748 312 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 PTPN3P26045 913 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 TPMTP51580 245 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 WASHC5Q12768 1159 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 ZBTB17Q13105 803 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 ZNF805Q5CZA5 627 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 CFAP58Q5T655 872 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 ITPRIPL1Q6GPH6 555 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 NCEH1Q6PIU2 408 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 CNTD1Q8N815 330 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 GRIN3AQ8TCU5 1115 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 C1orf54Q8WWF1 131 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 PPP1R2P1Q96PQ5 205 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 SEMA3CQ99985 751 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 FAM118BQ9BPY3 351 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 HDAC8Q9BY41 377 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 SLC25A51Q9H1U9 297 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 SLC6A17Q9H1V8 727 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 USP29Q9HBJ7 922 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 FBXL12Q9NXK8 326 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 USP36Q9P275 1121 aaKnown RBP19.8■□□□□ 0.76
CIRBP-220ENST00000588917 KLHL8Q9P2G9 620 aaPredicted RBP19.8■□□□□ 0.76
CIRBP-220ENST00000588917 DKK3Q9UBP4 350 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 SARDHQ9UL12 918 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 FZD4Q9ULV1 537 aa19.8■□□□□ 0.76
CIRBP-220ENST00000588917 MYO18AQ92614 2054 aaKnown RBP19.8■□□□□ 0.76
CIRBP-220ENST00000588917 C5orf60A6NFR6 353 aa19.79■□□□□ 0.76
CIRBP-220ENST00000588917 RNF103O00237 685 aa19.79■□□□□ 0.76
CIRBP-220ENST00000588917 SLC7A4O43246 635 aa19.79■□□□□ 0.76
CIRBP-220ENST00000588917 SOCS5O75159 536 aa19.79■□□□□ 0.76
CIRBP-220ENST00000588917 RNASEH2AO75792 299 aaKnown RBP19.79■□□□□ 0.76
CIRBP-220ENST00000588917 HLA-DQB2P05538 268 aa19.79■□□□□ 0.76
CIRBP-220ENST00000588917 CTSLP07711 333 aa19.79■□□□□ 0.76
CIRBP-220ENST00000588917 NFKBIAP25963 317 aa19.79■□□□□ 0.76
CIRBP-220ENST00000588917 ITGB7P26010 798 aa19.79■□□□□ 0.76
CIRBP-220ENST00000588917 ACTN2P35609 894 aa19.79■□□□□ 0.76
CIRBP-220ENST00000588917 RGRP47804 291 aa19.79■□□□□ 0.76
CIRBP-220ENST00000588917 SUOXP51687 545 aa19.79■□□□□ 0.76
CIRBP-220ENST00000588917 MAXP61244 160 aa19.79■□□□□ 0.76
CIRBP-220ENST00000588917 SIX1Q15475 284 aaPredicted RBP19.79■□□□□ 0.76
CIRBP-220ENST00000588917 SLC36A4Q6YBV0 504 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 636.4 ms