RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 NCKIPSDQ9NZQ3 722 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 HECAQ9UBI9 543 aaPredicted RBP18.72■□□□□ 0.59
CCDC43-204ENST00000588687 PCDHGA8Q9Y5G5 932 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 CDRT15L2A8MXV6 281 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 GOLGA8SH3BPF8 625 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 RIOK3O14730 519 aaKnown RBP18.71■□□□□ 0.59
CCDC43-204ENST00000588687 FPGTO14772 594 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 KLK10O43240 276 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 ZNF805Q5CZA5 627 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 ARHGAP40Q5TG30 622 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 TAF3Q5VWG9 929 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 SLC35F3Q8IY50 421 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 LMX1AQ8TE12 382 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 TBATAQ96M53 351 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 SLC46A1Q96NT5 459 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 ABCG4Q9H172 646 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 EVA1BQ9NVM1 165 aa18.71■□□□□ 0.59
CCDC43-204ENST00000588687 F8VZ95 297 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 FAM72CH0Y354 149 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 GSRP00390 522 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 MMEP08473 750 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 DNA2P51530 1060 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 RAPGEF1Q13905 1077 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 CAMK4Q16566 473 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 VWA3BQ502W6 1294 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 FAM72AQ5TYM5 149 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 KLHDC7AQ5VTJ3 777 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 BROXQ5VW32 411 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 FAM72DQ6L9T8 149 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 CRTC1Q6UUV9 634 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 FAM72BQ86X60 149 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 OR2AP1Q8NGE2 309 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 GRAMD1AQ96CP6 724 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 MAGEB5Q9BZ81 275 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 CLPBQ9H078 707 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 METTL5Q9NRN9 209 aaKnown RBP18.7■□□□□ 0.58
CCDC43-204ENST00000588687 TMEM248Q9NWD8 314 aa18.7■□□□□ 0.58
CCDC43-204ENST00000588687 APOBEC3BQ9UH17 382 aaKnown RBP18.7■□□□□ 0.58
CCDC43-204ENST00000588687 NOCTQ9UK39 431 aaKnown RBP18.7■□□□□ 0.58
CCDC43-204ENST00000588687 AHCTF1Q8WYP5 2266 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 CPED1A4D0V7 1026 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 TCEA3O75764 348 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 UGT2B4P06133 528 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 RHOQP17081 205 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 MAPKAPK2P49137 400 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 ATP11AP98196 1134 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 VAC14Q08AM6 782 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 BECN1Q14457 450 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 NR0B2Q15466 257 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 C15orf59Q2T9L4 293 aaPredicted RBP18.69■□□□□ 0.58
CCDC43-204ENST00000588687 LRRC73Q5JTD7 316 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 C6orf132Q5T0Z8 1188 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 NAA35Q5VZE5 725 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 RBM44Q6ZP01 1051 aaKnown RBP18.69■□□□□ 0.58
CCDC43-204ENST00000588687 CLEC14AQ86T13 490 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 PHACTR4Q8IZ21 702 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 MLKLQ8NB16 471 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 CPA5Q8WXQ8 436 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.69■□□□□ 0.58
CCDC43-204ENST00000588687 NOL6Q9H6R4 1146 aaKnown RBP18.69■□□□□ 0.58
CCDC43-204ENST00000588687 OR12D3Q9UGF7 316 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 SCN8AQ9UQD0 1980 aa18.69■□□□□ 0.58
CCDC43-204ENST00000588687 LMO7DNF2Z398 122 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 LRIG2O94898 1065 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 CELA2BP08218 269 aaPredicted RBP18.68■□□□□ 0.58
CCDC43-204ENST00000588687 UCHL3P15374 230 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 ADRA1BP35368 520 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 ETFBP38117 255 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 SGCGQ13326 291 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 CCDC14Q49A88 953 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 TAF1BQ53T94 588 aaPredicted RBP18.68■□□□□ 0.58
CCDC43-204ENST00000588687 ATXN7L2Q5T6C5 722 aaPredicted RBP18.68■□□□□ 0.58
CCDC43-204ENST00000588687 MACC1Q6ZN28 852 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 TP53I13Q8NBR0 393 aaPredicted RBP18.68■□□□□ 0.58
CCDC43-204ENST00000588687 BTN2A2Q8WVV5 523 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 KLHL32Q96NJ5 620 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 TUBGCP2Q9BSJ2 902 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 OSBPL1AQ9BXW6 950 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 PDCL3Q9H2J4 239 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 RETREG1Q9H6L5 497 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 MBNL1Q9NR56 388 aaKnown RBP18.68■□□□□ 0.58
CCDC43-204ENST00000588687 SPASTQ9UBP0 616 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 DNAI1Q9UI46 699 aa18.68■□□□□ 0.58
CCDC43-204ENST00000588687 UBR5O95071 2799 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-204ENST00000588687 HECTD1Q9ULT8 2610 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 C2CD4BA6NLJ0 364 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 K7ENP7 123 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 KRIT1O00522 736 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 NTN3O00634 580 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-204ENST00000588687 MUSKO15146 869 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 MMP8P22894 467 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 HDAC4P56524 1084 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 C1orf61Q13536 156 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 LY6DQ14210 128 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 MYLK3Q32MK0 819 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 DPCR1Q3MIW9 517 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 PRRT3Q5FWE3 981 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 INO80CQ6PI98 192 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-204ENST00000588687 LEKR1Q6ZMV7 388 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 CCDC185Q8N715 623 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms