RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 KAZNQ674X7 775 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 GDPD4Q6W3E5 623 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 ERN2Q76MJ5 926 aaKnown RBP20.47■□□□□ 0.87
DDX39A-207ENST00000588542 PARS2Q7L3T8 475 aaKnown RBP20.47■□□□□ 0.87
DDX39A-207ENST00000588542 SRLQ86TD4 932 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 SYT12Q8IV01 421 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 PIGKQ92643 395 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 ANP32BQ92688 251 aaKnown RBP20.47■□□□□ 0.87
DDX39A-207ENST00000588542 PPP1R16AQ96I34 528 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 KLHL32Q96NJ5 620 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 OLFM3Q96PB7 478 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 HERPUD2Q9BSE4 406 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 OSBPL1AQ9BXW6 950 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 SMOC1Q9H4F8 434 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 PACSIN2Q9UNF0 486 aaPredicted RBP20.47■□□□□ 0.87
DDX39A-207ENST00000588542 PPP2R2CQ9Y2T4 447 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.47■□□□□ 0.87
DDX39A-207ENST00000588542 LRRK1Q38SD2 2015 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 DMXL1Q9Y485 3027 aa20.47■□□□□ 0.87
DDX39A-207ENST00000588542 ATXN2Q99700 1313 aaKnown RBP20.47■□□□□ 0.87
DDX39A-207ENST00000588542 TP53BP1Q12888 1972 aaPredicted RBP20.46■□□□□ 0.87
DDX39A-207ENST00000588542 TRPM6Q9BX84 2022 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 FAM47DPA6NHR8 397 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 LRRC72A6NJI9 287 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 MATN3O15232 486 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 DDX3YO15523 660 aaKnown RBP20.46■□□□□ 0.87
DDX39A-207ENST00000588542 CST8O60676 142 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 PIGNO95427 931 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 CR2P20023 1033 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 MAOBP27338 520 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 RENBPP51606 427 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 RWDD2BP57060 319 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 COPS2P61201 443 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 HNRNPDQ14103 355 aaKnown RBP20.46■□□□□ 0.87
DDX39A-207ENST00000588542 TFDP2Q14188 446 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 ZNF235Q14590 738 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 MARC1Q5VT66 337 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 KIAA0895LQ68EN5 471 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 CCDC50Q8IVM0 306 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 BIRC7Q96CA5 298 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 ZNF830Q96NB3 372 aaPredicted RBP20.46■□□□□ 0.87
DDX39A-207ENST00000588542 LGMNQ99538 433 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 KDM4CQ9H3R0 1056 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 LZTFL1Q9NQ48 299 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 DYRK4Q9NR20 520 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 SEMA4GQ9NTN9 838 aa20.46■□□□□ 0.87
DDX39A-207ENST00000588542 SAE1Q9UBE0 346 aaPredicted RBP20.46■□□□□ 0.87
DDX39A-207ENST00000588542 CACNA1EQ15878 2313 aa20.45■□□□□ 0.87
DDX39A-207ENST00000588542 TTC24A2A3L6 582 aaPredicted RBP20.45■□□□□ 0.86
DDX39A-207ENST00000588542 C16orf96A6NNT2 1141 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 MEI4A8MW99 385 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 MIF4GDA9UHW6 222 aaKnown RBP20.45■□□□□ 0.86
DDX39A-207ENST00000588542 ZNF806P0C7X5 589 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 PYGMP11217 842 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 ADRB3P13945 408 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 PECAM1P16284 738 aaPredicted RBP20.45■□□□□ 0.86
DDX39A-207ENST00000588542 MMP13P45452 471 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 NEK3P51956 506 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 PPIDQ08752 370 aaKnown RBP20.45■□□□□ 0.86
DDX39A-207ENST00000588542 CSRP2Q16527 193 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 WDR45BQ5MNZ6 344 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 SYCP2LQ5T4T6 812 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 TIGD7Q6NT04 549 aaPredicted RBP20.45■□□□□ 0.86
DDX39A-207ENST00000588542 AADACL2Q6P093 401 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 CCNYQ8ND76 341 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 NSMCE1Q8WV22 266 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 HES6Q96HZ4 224 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 MGME1Q9BQP7 344 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 ORAI3Q9BRQ5 295 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 HEMGNQ9BXL5 484 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 VPS45Q9NRW7 570 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 PCDH15Q96QU1 1955 aa20.45■□□□□ 0.86
DDX39A-207ENST00000588542 TBC1D3DA0A087WVF3 549 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 TBC1D3IA0A087WXS9 549 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 TBC1D3EA0A087X179 549 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 TBC1D3KA0A087X1G2 549 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 TBC1D3FA6NER0 549 aaPredicted RBP20.44■□□□□ 0.86
DDX39A-207ENST00000588542 PATE3B3GLJ2 98 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 TBC1D3LB9A6J9 549 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 FSBPO95073 299 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 TBC1D3HP0C7X1 549 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 TGM2P21980 687 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 PTPN7P35236 360 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 HOXD12P35452 270 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 HSPA9P38646 679 aaKnown RBP20.44■□□□□ 0.86
DDX39A-207ENST00000588542 ABL2P42684 1182 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 SCNN1BP51168 640 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 CCR5P51681 352 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 PPP2CBP62714 309 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 PPP2CAP67775 309 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 GRM3Q14832 879 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 TBC1D3GQ6DHY5 549 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 TBC1D3CQ6IPX1 549 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 BBS12Q6ZW61 710 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 CCDC13Q8IYE1 715 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 RGL4Q8IZJ4 473 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 TBC1D3Q8IZP1 549 aaPredicted RBP20.44■□□□□ 0.86
DDX39A-207ENST00000588542 C1orf216Q8TAB5 229 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 TUBGCP5Q96RT8 1024 aa20.44■□□□□ 0.86
DDX39A-207ENST00000588542 SUV39H2Q9H5I1 410 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms