RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 LRRN4Q8WUT4 740 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 NRG4Q8WWG1 115 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 SMARCD2Q92925 531 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 HSFY1Q96LI6 401 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 TRIM56Q9BRZ2 755 aaKnown RBP14.86□□□□□ -0.03
CCDC43-203ENST00000588210 SLC46A2Q9BY10 475 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 DHX35Q9H5Z1 703 aaKnown RBP14.86□□□□□ -0.03
CCDC43-203ENST00000588210 TRPV4Q9HBA0 871 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 LRRC4Q9HBW1 653 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 AP4E1Q9UPM8 1137 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 LRCH1Q9Y2L9 728 aa14.86□□□□□ -0.03
CCDC43-203ENST00000588210 B2RBV5 119 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 H3BRJ5 948 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 ENO1P06733 434 aaKnown RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 TFE3P19532 575 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 TKTL1P51854 596 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 AQP5P55064 265 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 SESN3P58005 492 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 SARNPP82979 210 aaKnown RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 KLC1Q07866 573 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 HTR4Q13639 388 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 ZRSR2Q15696 482 aaKnown RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 DNAL1Q4LDG9 190 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 FAM78AQ5JUQ0 283 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 MROH9Q5TGP6 573 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 NCBP2-AS2Q69YL0 99 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 TXNDC8Q6A555 127 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 HEATR6Q6AI08 1181 aaKnown RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 PARM1Q6UWI2 310 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 APLFQ8IW19 511 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 CMTM8Q8IZV2 173 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 FAM136AQ96C01 138 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 OLFM3Q96PB7 478 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 CSPG4P5Q96PW8 444 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 KCTD15Q96SI1 283 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 CCDC106Q9BWC9 280 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 ZFP14Q9HCL3 533 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 TLR8Q9NR97 1041 aaKnown RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 THAP1Q9NVV9 213 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 ZNF212Q9UDV6 495 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 PLA2G4CQ9UP65 541 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 OBSL1O75147 1896 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 HACD1B0YJ81 288 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 SPECC1L-ADORA2AF8WAN1 911 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 SKAP2O75563 359 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 NEBLO76041 1014 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 SERPINA6P08185 405 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 ZDHHC11BP0C7U3 371 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 FDFT1P37268 417 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 AVPR1AP37288 418 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 RPL34P49207 117 aaKnown RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 NIPAL4Q0D2K0 466 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 STX3Q13277 289 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 NAB1Q13506 487 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 LBRQ14739 615 aaKnown RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 IRGCQ6NXR0 463 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 NET1Q7Z628 596 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 RBM15BQ8NDT2 890 aaKnown RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 FGF14Q92915 247 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 ELSPBP1Q96BH3 223 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 COL25A1Q9BXS0 654 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 ZNF395Q9H8N7 513 aaPredicted RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 EIF2B3Q9NR50 452 aaKnown RBP14.85□□□□□ -0.03
CCDC43-203ENST00000588210 SORCS3Q9UPU3 1222 aa14.85□□□□□ -0.03
CCDC43-203ENST00000588210 A0A0A0MRY4 1105 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 GLRA3O75311 464 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 ECI2O75521 394 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 TM7SF2O76062 418 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 LINGO3P0C6S8 592 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 VAV1P15498 845 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 CPA2P48052 419 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 PSEN1P49768 467 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 AP1B1Q10567 949 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 THOC5Q13769 683 aaKnown RBP14.84□□□□□ -0.03
CCDC43-203ENST00000588210 PM20D1Q6GTS8 502 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 SCML4Q8N228 414 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 SPATA13Q96N96 652 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 C20orf27Q9GZN8 174 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 STN1Q9H668 368 aaKnown RBP14.84□□□□□ -0.03
CCDC43-203ENST00000588210 TRPC7Q9HCX4 862 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 DTLQ9NZJ0 730 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 GMIPQ9P107 970 aa14.84□□□□□ -0.03
CCDC43-203ENST00000588210 RCOR3Q9P2K3 495 aaPredicted RBP14.84□□□□□ -0.03
CCDC43-203ENST00000588210 ANAPC1Q9H1A4 1944 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 TRAV19A0A0A6YYK7 116 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 SDR42E2A6NKP2 422 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 GSRP00390 522 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 ASGR2P07307 311 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 FCARP24071 287 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 GRIA1P42261 906 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 TUBP50607 506 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 TRMT5Q32P41 509 aaKnown RBP14.83□□□□□ -0.03
CCDC43-203ENST00000588210 MBLAC2Q68D91 279 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 LRRC8BQ6P9F7 803 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 SIX6OS1Q8N1H7 587 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 ARHGAP18Q8N392 663 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 FBXO27Q8NI29 283 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 TFB1MQ8WVM0 346 aaKnown RBP14.83□□□□□ -0.03
CCDC43-203ENST00000588210 HTR3CQ8WXA8 447 aa14.83□□□□□ -0.03
CCDC43-203ENST00000588210 SCG3Q8WXD2 468 aaKnown RBP14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms