RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 HIPK3Q9H422 1215 aa5.73□□□□□ -1.49
TUBD1-208ENST00000588009 PLEKHA4Q9H4M7 779 aa5.73□□□□□ -1.49
TUBD1-208ENST00000588009 MMRN2Q9H8L6 949 aa5.73□□□□□ -1.49
TUBD1-208ENST00000588009 ASAH2Q9NR71 780 aa5.73□□□□□ -1.49
TUBD1-208ENST00000588009 SLC6A13Q9NSD5 602 aa5.73□□□□□ -1.49
TUBD1-208ENST00000588009 MRPL15Q9P015 296 aaKnown RBP5.73□□□□□ -1.49
TUBD1-208ENST00000588009 ADAM21Q9UKJ8 722 aa5.73□□□□□ -1.49
TUBD1-208ENST00000588009 CYP2D7A0A087X1C5 515 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 FAM90A8PA6NJQ4 464 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 FAM157AC9JC47 383 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 UBE2CO00762 179 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 SCAMP1O15126 338 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 TFP02787 698 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 CHRM5P08912 532 aaPredicted RBP5.72□□□□□ -1.49
TUBD1-208ENST00000588009 FAM90A13PP0C7W8 464 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 FAM90A24PP0C7X0 464 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 PTPN2P17706 415 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 GABRB1P18505 474 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 MAKP20794 623 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 SAT1P21673 171 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 KLRC2P26717 231 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 HOXA7P31268 230 aaPredicted RBP5.72□□□□□ -1.49
TUBD1-208ENST00000588009 HSD17B4P51659 736 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 MRPL12P52815 198 aaKnown RBP5.72□□□□□ -1.49
TUBD1-208ENST00000588009 SOX10P56693 466 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 ZBED6P86452 979 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 OLIG2Q13516 323 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 PRPF4BQ13523 1007 aaKnown RBP5.72□□□□□ -1.49
TUBD1-208ENST00000588009 FGFBP1Q14512 234 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 PLCB4Q15147 1175 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 NTRK2Q16620 822 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 WDR5BQ86VZ2 330 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 ARL14EPQ8N8R7 260 aaPredicted RBP5.72□□□□□ -1.49
TUBD1-208ENST00000588009 CAGE1Q8TC20 777 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 KAT2AQ92830 837 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 SLC22A18Q96BI1 424 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 PABPC5Q96DU9 382 aaKnown RBP5.72□□□□□ -1.49
TUBD1-208ENST00000588009 NCAPGQ9BPX3 1015 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 OR10A4Q9H209 315 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 KIF9Q9HAQ2 790 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 ZNF304Q9HCX3 659 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 CCDC177Q9NQR7 707 aaPredicted RBP5.72□□□□□ -1.49
TUBD1-208ENST00000588009 PLK2Q9NYY3 685 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 ABI3Q9P2A4 366 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 FBXL17Q9UF56 701 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 CNOT8Q9UFF9 292 aaKnown RBP5.72□□□□□ -1.49
TUBD1-208ENST00000588009 SLC8A2Q9UPR5 921 aa5.72□□□□□ -1.49
TUBD1-208ENST00000588009 CDRT15L2A8MXV6 281 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 TARM1B6A8C7 271 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 MGST3O14880 152 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 CSPG5O95196 566 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 PLAUP00749 431 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 HOXB5P09067 269 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 YWHAQP27348 245 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 F2RL1P55085 397 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 HDAC4P56524 1084 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 CLDN2P57739 230 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 SLC18A2Q05940 514 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 AIMP1Q12904 312 aaKnown RBP5.71□□□□□ -1.5
TUBD1-208ENST00000588009 PCLAFQ15004 111 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 KIAA0930Q6ICG6 404 aaPredicted RBP5.71□□□□□ -1.5
TUBD1-208ENST00000588009 JADE1Q6IE81 842 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 CRELD2Q6UXH1 353 aaPredicted RBP5.71□□□□□ -1.5
TUBD1-208ENST00000588009 GLDNQ6ZMI3 551 aaPredicted RBP5.71□□□□□ -1.5
TUBD1-208ENST00000588009 ADGRA1Q86SQ6 560 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 DHX40Q8IX18 779 aaKnown RBP5.71□□□□□ -1.5
TUBD1-208ENST00000588009 KIAA2013Q8IYS2 634 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 OR4N2Q8NGD1 307 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 GABPB2Q8TAK5 448 aaPredicted RBP5.71□□□□□ -1.5
TUBD1-208ENST00000588009 ZKSCAN4Q969J2 545 aaPredicted RBP5.71□□□□□ -1.5
TUBD1-208ENST00000588009 SAT2Q96F10 170 aaPredicted RBP5.71□□□□□ -1.5
TUBD1-208ENST00000588009 RITA1Q96K30 269 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 TIMP4Q99727 224 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 NUF2Q9BZD4 464 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 GIMAP4Q9NUV9 329 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 IPO11Q9UI26 975 aaKnown RBP5.71□□□□□ -1.5
TUBD1-208ENST00000588009 NENFQ9UMX5 172 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 FAM96BQ9Y3D0 163 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 FAM169AQ9Y6X4 670 aa5.71□□□□□ -1.5
TUBD1-208ENST00000588009 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.7□□□□□ -1.5
TUBD1-208ENST00000588009 NPIPB11E5RHQ5 1161 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 CTDSP2O14595 271 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 INPPL1O15357 1258 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 SEC14L5O43304 696 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 SLC25A17O43808 307 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 MT-CYBP00156 380 aaPredicted RBP5.7□□□□□ -1.5
TUBD1-208ENST00000588009 LCKP06239 509 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 KRT10P13645 584 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 WT1P19544 449 aaPredicted RBP5.7□□□□□ -1.5
TUBD1-208ENST00000588009 PTGER1P34995 402 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 NRIP1P48552 1158 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 RRP1P56182 461 aaKnown RBP5.7□□□□□ -1.5
TUBD1-208ENST00000588009 COL28A1Q2UY09 1125 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 SYTL3Q4VX76 610 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 TBC1D26Q86UD7 250 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 TRIM74Q86UV6 250 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 TRIM73Q86UV7 250 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 CCDC25Q86WR0 208 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 VSIG1Q86XK7 387 aa5.7□□□□□ -1.5
TUBD1-208ENST00000588009 TDRPQ86YL5 185 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms