RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 USP12O75317 370 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 GJB6O95452 261 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 UGT2B4P06133 528 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 JUNDP17535 347 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 PTPN9P43378 593 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 KLK7P49862 253 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 HDAC4P56524 1084 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 JAM2P57087 298 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 PCBP4P57723 403 aaKnown RBP19.65■□□□□ 0.74
TRAF4-216ENST00000586813 SNRPD1P62314 119 aaKnown RBP19.65■□□□□ 0.74
TRAF4-216ENST00000586813 CDKN3Q16667 212 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 LEKR1Q6ZMV7 388 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 ZNF248Q8NDW4 579 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 MAPK15Q8TD08 544 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 CENPIQ92674 756 aaPredicted RBP19.65■□□□□ 0.74
TRAF4-216ENST00000586813 ARHGEF26Q96DR7 871 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 HIC2Q96JB3 615 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 ZNF578Q96N58 590 aaPredicted RBP19.65■□□□□ 0.74
TRAF4-216ENST00000586813 OSBPL1AQ9BXW6 950 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 MAGEB5Q9BZ81 275 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 NCKIPSDQ9NZQ3 722 aa19.65■□□□□ 0.74
TRAF4-216ENST00000586813 LZTS3O60299 673 aaPredicted RBP19.64■□□□□ 0.73
TRAF4-216ENST00000586813 DXOO77932 396 aaKnown RBP19.64■□□□□ 0.73
TRAF4-216ENST00000586813 PLEKP08567 350 aaPredicted RBP19.64■□□□□ 0.73
TRAF4-216ENST00000586813 SOX5P35711 763 aa19.64■□□□□ 0.73
TRAF4-216ENST00000586813 POLR2FP61218 127 aaKnown RBP19.64■□□□□ 0.73
TRAF4-216ENST00000586813 EIF2B5Q13144 721 aaKnown RBP19.64■□□□□ 0.73
TRAF4-216ENST00000586813 DEFB133Q30KQ1 61 aa19.64■□□□□ 0.73
TRAF4-216ENST00000586813 CT47A1Q5JQC4 288 aaPredicted RBP19.64■□□□□ 0.73
TRAF4-216ENST00000586813 TRIM72Q6ZMU5 477 aa19.64■□□□□ 0.73
TRAF4-216ENST00000586813 GPR155Q7Z3F1 870 aa19.64■□□□□ 0.73
TRAF4-216ENST00000586813 LSMEM2Q8N112 164 aa19.64■□□□□ 0.73
TRAF4-216ENST00000586813 FAM172AQ8WUF8 416 aa19.64■□□□□ 0.73
TRAF4-216ENST00000586813 KLHL32Q96NJ5 620 aa19.64■□□□□ 0.73
TRAF4-216ENST00000586813 POLR1BQ9H9Y6 1135 aa19.64■□□□□ 0.73
TRAF4-216ENST00000586813 FAM207AQ9NSI2 230 aaPredicted RBP19.64■□□□□ 0.73
TRAF4-216ENST00000586813 LRP4O75096 1905 aa19.64■□□□□ 0.73
TRAF4-216ENST00000586813 MGAQ8IWI9 3026 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 RP1P56715 2156 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 TEX51A0A1B0GUA7 166 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 AREL1O15033 823 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 EPHB6O15197 1021 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 KDELR3O43731 214 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 C1QL1O75973 258 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 POP4O95707 220 aaKnown RBP19.63■□□□□ 0.73
TRAF4-216ENST00000586813 LSSP48449 732 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 GSCP56915 257 aaPredicted RBP19.63■□□□□ 0.73
TRAF4-216ENST00000586813 CXADRP78310 365 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 PTP4A2Q12974 167 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 MYLK3Q32MK0 819 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 LRRC73Q5JTD7 316 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 ATXN7L2Q5T6C5 722 aaPredicted RBP19.63■□□□□ 0.73
TRAF4-216ENST00000586813 GUSBP11Q6P575 273 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 LMX1AQ8TE12 382 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 NTAN1Q96AB6 310 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 CENPTQ96BT3 561 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 NAF1Q96HR8 494 aaKnown RBP19.63■□□□□ 0.73
TRAF4-216ENST00000586813 GDAP1L1Q96MZ0 367 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 VPS16Q9H269 839 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 NLRC4Q9NPP4 1024 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 CHMP5Q9NZZ3 219 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 SALL4Q9UJQ4 1053 aa19.63■□□□□ 0.73
TRAF4-216ENST00000586813 ATMQ13315 3056 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 CPED1A4D0V7 1026 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 ZSCAN5CA6NGD5 496 aaPredicted RBP19.62■□□□□ 0.73
TRAF4-216ENST00000586813 RIOK3O14730 519 aaKnown RBP19.62■□□□□ 0.73
TRAF4-216ENST00000586813 TPP1O14773 563 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 TMCC1O94876 653 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 KRT3P12035 628 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 UNGP13051 313 aaPredicted RBP19.62■□□□□ 0.73
TRAF4-216ENST00000586813 TGM2P21980 687 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 IGFALSP35858 605 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 THOP1P52888 689 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 ERVPABLB-1P60509 514 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 C19orf57Q0VDD7 668 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 KRT31Q15323 416 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 ISXQ2M1V0 245 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 GDPD4Q6W3E5 623 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 EFL1Q7Z2Z2 1120 aaKnown RBP19.62■□□□□ 0.73
TRAF4-216ENST00000586813 RBFAQ8N0V3 343 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 LSM14AQ8ND56 463 aaKnown RBP19.62■□□□□ 0.73
TRAF4-216ENST00000586813 BTN2A2Q8WVV5 523 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 IL12RB2Q99665 862 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 ASCL3Q9NQ33 180 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 SPASTQ9UBP0 616 aa19.62■□□□□ 0.73
TRAF4-216ENST00000586813 APOBEC3BQ9UH17 382 aaKnown RBP19.62■□□□□ 0.73
TRAF4-216ENST00000586813 ANKRD36A6QL64 1941 aa19.61■□□□□ 0.73
TRAF4-216ENST00000586813 EME2A4GXA9 379 aaPredicted RBP19.61■□□□□ 0.73
TRAF4-216ENST00000586813 BUB1O43683 1085 aa19.61■□□□□ 0.73
TRAF4-216ENST00000586813 GPD1P21695 349 aa19.61■□□□□ 0.73
TRAF4-216ENST00000586813 RFC1P35251 1148 aaPredicted RBP19.61■□□□□ 0.73
TRAF4-216ENST00000586813 NSFP46459 744 aaKnown RBP19.61■□□□□ 0.73
TRAF4-216ENST00000586813 PTK2BQ14289 1009 aa19.61■□□□□ 0.73
TRAF4-216ENST00000586813 NR0B2Q15466 257 aa19.61■□□□□ 0.73
TRAF4-216ENST00000586813 CDKAL1Q5VV42 579 aa19.61■□□□□ 0.73
TRAF4-216ENST00000586813 TTC7BQ86TV6 843 aa19.61■□□□□ 0.73
TRAF4-216ENST00000586813 VPS36Q86VN1 386 aa19.61■□□□□ 0.73
TRAF4-216ENST00000586813 ZNF354CQ86Y25 554 aa19.61■□□□□ 0.73
TRAF4-216ENST00000586813 PHACTR4Q8IZ21 702 aa19.61■□□□□ 0.73
TRAF4-216ENST00000586813 RTL3Q8N8U3 475 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms