RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 C3orf38Q5JPI3 329 aa20.42■□□□□ 0.86
CLPTM1-204ENST00000585961 BROXQ5VW32 411 aa20.42■□□□□ 0.86
CLPTM1-204ENST00000585961 ZCCHC8Q6NZY4 707 aaKnown RBP20.42■□□□□ 0.86
CLPTM1-204ENST00000585961 ZNF605Q86T29 641 aa20.42■□□□□ 0.86
CLPTM1-204ENST00000585961 VPS36Q86VN1 386 aa20.42■□□□□ 0.86
CLPTM1-204ENST00000585961 MSANTD4Q8NCY6 345 aa20.42■□□□□ 0.86
CLPTM1-204ENST00000585961 ISG20Q96AZ6 181 aaKnown RBP20.42■□□□□ 0.86
CLPTM1-204ENST00000585961 IL12RB2Q99665 862 aa20.42■□□□□ 0.86
CLPTM1-204ENST00000585961 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.42■□□□□ 0.86
CLPTM1-204ENST00000585961 EVA1BQ9NVM1 165 aa20.42■□□□□ 0.86
CLPTM1-204ENST00000585961 TMEM51Q9NW97 253 aa20.42■□□□□ 0.86
CLPTM1-204ENST00000585961 PMS2P1A4D2B8 440 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 BUB1O43683 1085 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 PLEKP08567 350 aaPredicted RBP20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 RHOQP17081 205 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 CHRNB2P17787 502 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 PFN3P60673 137 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 NR0B2Q15466 257 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 ARL13BQ3SXY8 428 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 PRRT3Q5FWE3 981 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 PERM1Q5SV97 790 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 FAXCQ5TGI0 409 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 NLRP14Q86W24 1093 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 PLPP6Q8IY26 295 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 LSMEM2Q8N112 164 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 EPS8L1Q8TE68 723 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 CENPTQ96BT3 561 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 VCPIP1Q96JH7 1222 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 USP29Q9HBJ7 922 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 MBNL1Q9NR56 388 aaKnown RBP20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 TAB2Q9NYJ8 693 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 PNMA8BQ9ULN7 279 aaPredicted RBP20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 CSNK1G3Q9Y6M4 447 aa20.41■□□□□ 0.86
CLPTM1-204ENST00000585961 F8VZ95 297 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 LRIG2O94898 1065 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 SNRPD1P62314 119 aaKnown RBP20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 SMYD5Q6GMV2 418 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 GDPD4Q6W3E5 623 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 PYROXD2Q8N2H3 581 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 CCDC185Q8N715 623 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 OR2AP1Q8NGE2 309 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 KCNE4Q8WWG9 221 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 RAB7BQ96AH8 199 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 VOPP1Q96AW1 172 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 C11orf70Q9BRQ4 267 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 WRAP53Q9BUR4 548 aaKnown RBP20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 KLC2Q9H0B6 622 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 MAGEH1Q9H213 219 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 VPS16Q9H269 839 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 CLSTN2Q9H4D0 955 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 ASCL3Q9NQ33 180 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 WDR70Q9NW82 654 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 TMEM248Q9NWD8 314 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 SPASTQ9UBP0 616 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 GULP1Q9UBP9 304 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 SALL4Q9UJQ4 1053 aa20.4■□□□□ 0.86
CLPTM1-204ENST00000585961 EME2A4GXA9 379 aaPredicted RBP20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 KDELR3O43731 214 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 RAMP2O60895 175 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 TIMP2P16035 220 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 RBMS1P29558 406 aaKnown RBP20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 SDC4P31431 198 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 THOP1P52888 689 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 ERVPABLB-1P60509 514 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 CFHR1Q03591 330 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 TCP11X2Q5H9J9 407 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 MANEALQ5VSG8 457 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 ARCQ7LC44 396 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 TBC1D31Q96DN5 1066 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 SYNDIG1Q9H7V2 258 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 NLRC4Q9NPP4 1024 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 APOBEC3BQ9UH17 382 aaKnown RBP20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 NOCTQ9UK39 431 aaKnown RBP20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 ENTPD2Q9Y5L3 495 aa20.39■□□□□ 0.85
CLPTM1-204ENST00000585961 C2CD4BA6NLJ0 364 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 YY2O15391 372 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 INSIG1O15503 277 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 DXOO77932 396 aaKnown RBP20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 GSRP00390 522 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 CYP1A1P04798 512 aaPredicted RBP20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 CELA2BP08218 269 aaPredicted RBP20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 MMP8P22894 467 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 ERCC5P28715 1186 aaPredicted RBP20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 IGFALSP35858 605 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 ETFBP38117 255 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 EIF4A3P38919 411 aaKnown RBP20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 MAPKAPK2P49137 400 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 TMPRSS3P57727 454 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 POLR2FP61218 127 aaKnown RBP20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 FMO1Q01740 532 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 KLHL40Q2TBA0 621 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 SCYL2Q6P3W7 929 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 SLC35F3Q8IY50 421 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 PHACTR4Q8IZ21 702 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 LSM14AQ8ND56 463 aaKnown RBP20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 CXorf40AQ8TE69 158 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 FAM172AQ8WUF8 416 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 BTN2A2Q8WVV5 523 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 ASB12Q8WXK4 309 aa20.38■□□□□ 0.85
CLPTM1-204ENST00000585961 SLC46A1Q96NT5 459 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms