RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 GKP32189 559 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 MAGEA1P43355 309 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 CSNK1DP48730 415 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 RENBPP51606 427 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 RPS21P63220 83 aaKnown RBP27.54■■■□□ 2
SMARCD2-210ENST00000584400 SUZ12Q15022 739 aaKnown RBP27.54■■■□□ 2
SMARCD2-210ENST00000584400 TCEAL1Q15170 157 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 BBS5Q8N3I7 341 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 MFSD2AQ8NA29 543 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 CHD5Q8TDI0 1954 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 PANX2Q96RD6 677 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 DKK3Q9UBP4 350 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 DMXL1Q9Y485 3027 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 FADS3Q9Y5Q0 445 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 SNX11Q9Y5W9 270 aa27.54■■■□□ 2
SMARCD2-210ENST00000584400 PCDH15Q96QU1 1955 aa27.53■■■□□ 2
SMARCD2-210ENST00000584400 NEMP1O14524 444 aa27.53■■■□□ 2
SMARCD2-210ENST00000584400 SLC1A1P43005 524 aa27.53■■■□□ 2
SMARCD2-210ENST00000584400 BNC1Q01954 994 aa27.53■■■□□ 2
SMARCD2-210ENST00000584400 CFAP58Q5T655 872 aa27.53■■■□□ 2
SMARCD2-210ENST00000584400 PSAPL1Q6NUJ1 521 aa27.53■■■□□ 2
SMARCD2-210ENST00000584400 IQCHQ86VS3 1027 aa27.53■■■□□ 2
SMARCD2-210ENST00000584400 EXOC2Q96KP1 924 aa27.53■■■□□ 2
SMARCD2-210ENST00000584400 TUBGCP5Q96RT8 1024 aa27.53■■■□□ 2
SMARCD2-210ENST00000584400 TM7SF3Q9NS93 570 aa27.53■■■□□ 2
SMARCD2-210ENST00000584400 SEPT3Q9UH03 358 aa27.53■■■□□ 2
SMARCD2-210ENST00000584400 IPO7O95373 1038 aaKnown RBP27.52■■■□□ 2
SMARCD2-210ENST00000584400 AKT2P31751 481 aa27.52■■■□□ 2
SMARCD2-210ENST00000584400 CTSKP43235 329 aa27.52■■■□□ 2
SMARCD2-210ENST00000584400 SUOXP51687 545 aa27.52■■■□□ 2
SMARCD2-210ENST00000584400 ARSEP51690 589 aa27.52■■■□□ 2
SMARCD2-210ENST00000584400 TAS2R40P59535 323 aa27.52■■■□□ 2
SMARCD2-210ENST00000584400 NSUN2Q08J23 767 aaKnown RBP eCLIP27.52■■■□□ 2
SMARCD2-210ENST00000584400 DPYSL3Q14195 570 aa27.52■■■□□ 2
SMARCD2-210ENST00000584400 TTC7BQ86TV6 843 aa27.52■■■□□ 2
SMARCD2-210ENST00000584400 TMTC1Q8IUR5 882 aa27.52■■■□□ 2
SMARCD2-210ENST00000584400 ATPAF2Q8N5M1 289 aa27.52■■■□□ 2
SMARCD2-210ENST00000584400 ZNF641Q96N77 438 aaPredicted RBP27.52■■■□□ 2
SMARCD2-210ENST00000584400 GDF3Q9NR23 364 aa27.52■■■□□ 2
SMARCD2-210ENST00000584400 PCDHGB2Q9Y5G2 931 aa27.52■■■□□ 2
SMARCD2-210ENST00000584400 LCA5LO95447 670 aa27.51■■□□□ 1.99
SMARCD2-210ENST00000584400 XPAP23025 273 aaPredicted RBP27.51■■□□□ 1.99
SMARCD2-210ENST00000584400 IL4RP24394 825 aa27.51■■□□□ 1.99
SMARCD2-210ENST00000584400 HSPA9P38646 679 aaKnown RBP27.51■■□□□ 1.99
SMARCD2-210ENST00000584400 LBRQ14739 615 aaKnown RBP27.51■■□□□ 1.99
SMARCD2-210ENST00000584400 NUMA1Q14980 2115 aa27.51■■□□□ 1.99
SMARCD2-210ENST00000584400 ZNF284Q2VY69 593 aa27.51■■□□□ 1.99
SMARCD2-210ENST00000584400 LAYNQ6UX15 382 aa27.51■■□□□ 1.99
SMARCD2-210ENST00000584400 NETO2Q8NC67 525 aa27.51■■□□□ 1.99
SMARCD2-210ENST00000584400 FAM174AQ8TBP5 190 aa27.51■■□□□ 1.99
SMARCD2-210ENST00000584400 ETNK2Q9NVF9 386 aa27.51■■□□□ 1.99
SMARCD2-210ENST00000584400 GON4LQ3T8J9 2241 aa27.51■■□□□ 1.99
SMARCD2-210ENST00000584400 A0A1W2PR77 199 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 TLR4O00206 839 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 SLC31A1O15431 190 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 CD48P09326 243 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 CD59P13987 128 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 HNRNPA2B1P22626 353 aaKnown RBP27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 CCT8P50990 548 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 ZNF235Q14590 738 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 ZNF423Q2M1K9 1284 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 ATP13A4Q4VNC1 1196 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 ODF2Q5BJF6 829 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 ANKRD20A8PQ5CZ79 823 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 ARHGAP36Q6ZRI8 547 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 PIP4P1Q86T03 277 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 OXR1Q8N573 874 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 TSEN2Q8NCE0 465 aaKnown RBP27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 DEFB124Q8NES8 71 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 PSKH2Q96QS6 385 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 SUV39H2Q9H5I1 410 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 ATP13A3Q9H7F0 1226 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 SPTBN4Q9H254 2564 aa27.5■■□□□ 1.99
SMARCD2-210ENST00000584400 MED19A0JLT2 244 aaPredicted RBP27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 YKT6O15498 198 aa27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 SERPINA4P29622 427 aa27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 NOP2P46087 812 aaKnown RBP27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 MMRN1Q13201 1228 aa27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 SGCGQ13326 291 aa27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 TMEM259Q4ZIN3 620 aa27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 LRRC38Q5VT99 294 aa27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 BRAT1Q6PJG6 821 aa27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 SRLQ86TD4 932 aa27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 SLC17A9Q9BYT1 436 aa27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 IL21RQ9HBE5 538 aa27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 HAUS2Q9NVX0 235 aa27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 FNDC3AQ9Y2H6 1198 aaKnown RBP27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 PCDHB9Q9Y5E1 797 aa27.49■■□□□ 1.99
SMARCD2-210ENST00000584400 WNT1P04628 370 aa27.48■■□□□ 1.99
SMARCD2-210ENST00000584400 ADRB1P08588 477 aa27.48■■□□□ 1.99
SMARCD2-210ENST00000584400 AP1S1P61966 158 aa27.48■■□□□ 1.99
SMARCD2-210ENST00000584400 ELP6Q0PNE2 266 aa27.48■■□□□ 1.99
SMARCD2-210ENST00000584400 PAFAH1B3Q15102 231 aaKnown RBP27.48■■□□□ 1.99
SMARCD2-210ENST00000584400 VSIG1Q86XK7 387 aa27.48■■□□□ 1.99
SMARCD2-210ENST00000584400 TMEM145Q8NBT3 493 aa27.48■■□□□ 1.99
SMARCD2-210ENST00000584400 VOPP1Q96AW1 172 aa27.48■■□□□ 1.99
SMARCD2-210ENST00000584400 KLHDC7BQ96G42 594 aa27.48■■□□□ 1.99
SMARCD2-210ENST00000584400 ELF4Q99607 663 aaPredicted RBP27.48■■□□□ 1.99
SMARCD2-210ENST00000584400 ERVMER34-1Q9H9K5 563 aa27.48■■□□□ 1.99
SMARCD2-210ENST00000584400 ZFR2Q9UPR6 939 aaKnown RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms