RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 DKK1O94907 266 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 IGSF6O95976 241 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 TPM1P09493 284 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 H2AFZP0C0S5 128 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 HNRNPA2B1P22626 353 aaKnown RBP10.04□□□□□ -0.8
SKA2-208ENST00000583927 IL1R2P27930 398 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 GRK6P43250 576 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 RPS21P63220 83 aaKnown RBP10.04□□□□□ -0.8
SKA2-208ENST00000583927 SLC25A11Q02978 314 aaKnown RBP10.04□□□□□ -0.8
SKA2-208ENST00000583927 IL10RBQ08334 325 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 NSUN2Q08J23 767 aaKnown RBP eCLIP10.04□□□□□ -0.8
SKA2-208ENST00000583927 STAT4Q14765 748 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 NFKBIBQ15653 356 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 TRIP6Q15654 476 aaKnown RBP10.04□□□□□ -0.8
SKA2-208ENST00000583927 TSR1Q2NL82 804 aaKnown RBP10.04□□□□□ -0.8
SKA2-208ENST00000583927 INAVAQ3KP66 663 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 POM121L1PQ3SYA9 428 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 FBXL19Q6PCT2 694 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 H2AFVQ71UI9 128 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 PARS2Q7L3T8 475 aaKnown RBP10.04□□□□□ -0.8
SKA2-208ENST00000583927 DCP2Q8IU60 420 aaKnown RBP10.04□□□□□ -0.8
SKA2-208ENST00000583927 LRRC49Q8IUZ0 686 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 SPOCK2Q92563 424 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 TSC1Q92574 1164 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 IFT43Q96FT9 208 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 FEM1CQ96JP0 617 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 ZNF599Q96NL3 588 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 NUP85Q9BW27 656 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 TM6SF2Q9BZW4 377 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 SLC39A8Q9C0K1 460 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 ZDHHC6Q9H6R6 413 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 GDF3Q9NR23 364 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 AASDHPPTQ9NRN7 309 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 GPR27Q9NS67 375 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 ABHD10Q9NUJ1 306 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 ZNHIT6Q9NWK9 470 aaKnown RBP10.04□□□□□ -0.8
SKA2-208ENST00000583927 GPATCH2LQ9NWQ4 482 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 CWC15Q9P013 229 aaKnown RBP10.04□□□□□ -0.8
SKA2-208ENST00000583927 LHX3Q9UBR4 397 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 UBA2Q9UBT2 640 aaPredicted RBP10.04□□□□□ -0.8
SKA2-208ENST00000583927 ZFR2Q9UPR6 939 aaKnown RBP10.04□□□□□ -0.8
SKA2-208ENST00000583927 PCDHB9Q9Y5E1 797 aa10.04□□□□□ -0.8
SKA2-208ENST00000583927 ANKRD11Q6UB99 2663 aaPredicted RBP10.04□□□□□ -0.8
SKA2-208ENST00000583927 ZFC3H1O60293 1989 aaKnown RBP10.03□□□□□ -0.8
SKA2-208ENST00000583927 TSPAN11A1L157 253 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 C16orf96A6NNT2 1141 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 H3BRJ5 948 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 DAPK3O43293 454 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 MFAP3LO75121 409 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 RARAP10276 462 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 MAT2AP31153 395 aaKnown RBP10.03□□□□□ -0.8
SKA2-208ENST00000583927 AKT2P31751 481 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 MAN1A1P33908 653 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 EIF4A3P38919 411 aaKnown RBP10.03□□□□□ -0.8
SKA2-208ENST00000583927 ARL4AP40617 200 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 ARRB1P49407 418 aaPredicted RBP10.03□□□□□ -0.8
SKA2-208ENST00000583927 PAPOLAP51003 745 aaKnown RBP10.03□□□□□ -0.8
SKA2-208ENST00000583927 DNA2P51530 1060 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 RHOAP61586 193 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 SIM1P81133 766 aaPredicted RBP10.03□□□□□ -0.8
SKA2-208ENST00000583927 TBX2Q13207 712 aaPredicted RBP10.03□□□□□ -0.8
SKA2-208ENST00000583927 CYTH1Q15438 398 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 PPP6R3Q5H9R7 873 aaPredicted RBP10.03□□□□□ -0.8
SKA2-208ENST00000583927 LAYNQ6UX15 382 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 GDPD4Q6W3E5 623 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 RAB44Q7Z6P3 723 aaPredicted RBP10.03□□□□□ -0.8
SKA2-208ENST00000583927 ABI3BPQ7Z7G0 1075 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 ZNF354CQ86Y25 554 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 CNGA4Q8IV77 575 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 DENND6BQ8NEG7 585 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 ZNF564Q8TBZ8 553 aaPredicted RBP10.03□□□□□ -0.8
SKA2-208ENST00000583927 SAP25Q8TEE9 199 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 ADAMTS14Q8WXS8 1223 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 ZNF641Q96N77 438 aaPredicted RBP10.03□□□□□ -0.8
SKA2-208ENST00000583927 TUBGCP5Q96RT8 1024 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 C1QTNF2Q9BXJ5 285 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 SLC17A9Q9BYT1 436 aa10.03□□□□□ -0.8
SKA2-208ENST00000583927 ARHGEF17Q96PE2 2063 aaPredicted RBP10.03□□□□□ -0.8
SKA2-208ENST00000583927 IGF2RP11717 2491 aa10.02□□□□□ -0.8
SKA2-208ENST00000583927 ASXL3Q9C0F0 2248 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 ZFHX4Q86UP3 3567 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 J3KR12 359 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 KRIT1O00522 736 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 TOR1BO14657 336 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 SPINT1O43278 529 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 MTA2O94776 668 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 PROSCO94903 275 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 PCDH8O95206 1070 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 UGT2B4P06133 528 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 TMEM253P0C7T8 217 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 TCF4P15884 667 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 SERPINB6P35237 376 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 RENBPP51606 427 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 ARSEP51690 589 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 FAM193AP78312 1265 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 AGERQ15109 404 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 TCEAL1Q15170 157 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 SHBQ15464 509 aa10.02□□□□□ -0.81
SKA2-208ENST00000583927 HADHQ16836 314 aaKnown RBP10.02□□□□□ -0.81
SKA2-208ENST00000583927 ATXN7L2Q5T6C5 722 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms