RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 INSIG1O15503 277 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PSMD3O43242 534 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GJB3O75712 270 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SEC31AO94979 1220 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GSRP00390 522 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MAGEA6P43360 314 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SNRPD1P62314 119 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SKOR1P84550 965 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ENPP2Q13822 863 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 NAA30Q147X3 362 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MYLK3Q32MK0 819 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 FNDC3BQ53EP0 1204 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RALGPS1Q5JS13 557 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ATXN7L2Q5T6C5 722 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RNASEH2BQ5TBB1 312 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 IZUMO3Q5VZ72 239 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 EGFLAMQ63HQ2 1017 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 NCEH1Q6PIU2 408 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ZNF852Q6ZMS4 543 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 IFT20Q8IY31 132 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SIX5Q8N196 739 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SPATA22Q8NHS9 363 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CPT1BQ92523 772 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PTPRN2Q92932 1015 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 OXNAD1Q96HP4 312 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 EXOC2Q96KP1 924 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 NSMCE3Q96MG7 304 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PPP1R2P1Q96PQ5 205 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MLPHQ9BV36 600 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TNKS2Q9H2K2 1166 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SCUBE2Q9NQ36 999 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 FAM114A2Q9NRY5 505 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GRHL1Q9NZI5 618 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SUN2Q9UH99 717 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CA14Q9ULX7 337 aa16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 AAR2Q9Y312 384 aaKnown RBP16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 FARP1Q9Y4F1 1045 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TCRBV7S3A2A0A539 114 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ESYT3A0FGR9 886 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 KRBA1A5PL33 1030 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TP73O15350 636 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CTIFO43310 598 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ANXA9O76027 345 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 IGSF6O95976 241 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MT-CYBP00156 380 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CD72P21854 359 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CD86P42081 329 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 IL12RB1P42701 662 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ITGA8P53708 1063 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TERF1P54274 439 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GEMP55040 296 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 STARD6P59095 220 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 BASP1P80723 227 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 KCNJ11Q14654 390 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ANGPT1Q15389 498 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SLC14A2Q15849 920 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 KCTD11Q693B1 232 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 HIBCHQ6NVY1 386 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PPIL6Q8IXY8 311 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ZNF687Q8N1G0 1237 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GPR161Q8N6U8 529 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 PDCD7Q8N8D1 485 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 NAT8LQ8N9F0 302 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 DTWD2Q8NBA8 298 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 OR2AP1Q8NGE2 309 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 OR2A12Q8NGT7 310 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ART4Q93070 314 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 GDAP1L1Q96MZ0 367 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 RBM15Q96T37 977 aaKnown RBP eCLIP16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ACOX2Q99424 681 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TM6SF2Q9BZW4 377 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ARHGEF3Q9NR81 526 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 VPS45Q9NRW7 570 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 UBP1Q9NZI7 540 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 HECAQ9UBI9 543 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 FAM153AQ9UHL3 310 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ANAPC5Q9UJX4 755 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 FBXL21Q9UKT6 434 aa16.55■□□□□ 0.24
CDK5RAP3-228ENST00000583363 WDR87Q6ZQQ6 2873 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 WASH3PC4AMC7 463 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 E7EVH7 732 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 NDC80O14777 642 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 POP4O95707 220 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TPSB2P20231 275 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TIE1P35590 1138 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 SEC13P55735 322 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MRPS21P82921 87 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MPP3Q13368 585 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 CCINQ13939 588 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 MORF4L2Q15014 288 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 TPSAB1Q15661 275 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 HNRNPA1L2Q32P51 320 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 FBXO43Q4G163 708 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ANKRD22Q5VYY1 191 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 KDELC1Q6UW63 502 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 DPY19L3Q6ZPD9 716 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 Q6ZVU0 165 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 HOOK3Q86VS8 718 aa16.54■□□□□ 0.24
CDK5RAP3-228ENST00000583363 ZNF513Q8N8E2 541 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms