RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 PALMO75781 387 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 MAP3K6O95382 1288 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 COMTP21964 271 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 KDELR1P24390 212 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 CYLC1P35663 651 aaPredicted RBP20.39■□□□□ 0.85
SS18-218ENST00000581021 PDK2Q15119 407 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 KIF19Q2TAC6 998 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 ZNF805Q5CZA5 627 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 SEL1L3Q68CR1 1132 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 GDPD4Q6W3E5 623 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 ACRBPQ8NEB7 543 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 KLK6Q92876 244 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 LRIG1Q96JA1 1093 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 DYRK4Q9NR20 520 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 CA5BQ9Y2D0 317 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 FADS3Q9Y5Q0 445 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 NCOR2Q9Y618 2525 aa20.39■□□□□ 0.85
SS18-218ENST00000581021 A0A1W2PR77 199 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 TTC24A2A3L6 582 aaPredicted RBP20.38■□□□□ 0.85
SS18-218ENST00000581021 PRLRP16471 622 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 ITIH2P19823 946 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 SDHBP21912 280 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 GRIA4P48058 902 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 GBE1Q04446 702 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 FGL2Q14314 439 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 PAFAH1B3Q15102 231 aaKnown RBP20.38■□□□□ 0.85
SS18-218ENST00000581021 SPA17Q15506 151 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 ZNF284Q2VY69 593 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 UAP1L1Q3KQV9 507 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 TMEM259Q4ZIN3 620 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 ZSWIM9Q86XI8 627 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 PGBD5Q8N414 524 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 LRRN4Q8WUT4 740 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 OSBPL1AQ9BXW6 950 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 SNX11Q9Y5W9 270 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 DUSP10Q9Y6W6 482 aa20.38■□□□□ 0.85
SS18-218ENST00000581021 A0A0U1RQJ8 604 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 LRRD1A4D1F6 860 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 MARCKSL1P49006 195 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 RACK1P63244 317 aaKnown RBP20.37■□□□□ 0.85
SS18-218ENST00000581021 GALNT2Q10471 571 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 SLC10A2Q12908 348 aaPredicted RBP20.37■□□□□ 0.85
SS18-218ENST00000581021 TMCO4Q5TGY1 634 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 LRRC38Q5VT99 294 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 DGLUCYQ7Z3D6 616 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 HORMAD1Q86X24 394 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 ATPAF2Q8N5M1 289 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 SERAC1Q96JX3 654 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 PSKH2Q96QS6 385 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 BAG1Q99933 345 aaPredicted RBP20.37■□□□□ 0.85
SS18-218ENST00000581021 CINPQ9BW66 212 aaPredicted RBP20.37■□□□□ 0.85
SS18-218ENST00000581021 CPEB1Q9BZB8 566 aaKnown RBP20.37■□□□□ 0.85
SS18-218ENST00000581021 LACRTQ9GZZ8 138 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 DNAAF2Q9NVR5 837 aaKnown RBP20.37■□□□□ 0.85
SS18-218ENST00000581021 ANKRD6Q9Y2G4 727 aa20.37■□□□□ 0.85
SS18-218ENST00000581021 FNDC3AQ9Y2H6 1198 aaKnown RBP20.37■□□□□ 0.85
SS18-218ENST00000581021 A0A0A6YYK5 440 aaPredicted RBP20.36■□□□□ 0.85
SS18-218ENST00000581021 KCNK3O14649 394 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 AREL1O15033 823 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 KRT1P04264 644 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 SYPP08247 313 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 TNNT1P13805 278 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 TIMP2P16035 220 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 SERPINB6P35237 376 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 NOP2P46087 812 aaKnown RBP20.36■□□□□ 0.85
SS18-218ENST00000581021 RFTN1Q14699 578 aaPredicted RBP20.36■□□□□ 0.85
SS18-218ENST00000581021 LBRQ14739 615 aaKnown RBP20.36■□□□□ 0.85
SS18-218ENST00000581021 NAPEPLDQ6IQ20 393 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 FBXL19Q6PCT2 694 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 SRLQ86TD4 932 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 CAMK1DQ8IU85 385 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 PLD5Q8N7P1 536 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 TMEM145Q8NBT3 493 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 ZNF599Q96NL3 588 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 RNF157Q96PX1 679 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 MYOCQ99972 504 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 FZD3Q9NPG1 666 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 IMPACTQ9P2X3 320 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 ALG6Q9Y672 507 aa20.36■□□□□ 0.85
SS18-218ENST00000581021 TSPAN11A1L157 253 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 VILLO15195 856 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 AP1G1O43747 822 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 PCDH8O95206 1070 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 CD59P13987 128 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 GARSP41250 739 aaKnown RBP20.35■□□□□ 0.85
SS18-218ENST00000581021 SLC1A1P43005 524 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 CTSKP43235 329 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 CSNK1DP48730 415 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 ATXN3P54252 364 aaPredicted RBP20.35■□□□□ 0.85
SS18-218ENST00000581021 HLA-BQ31612 363 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 NEK5Q6P3R8 708 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 TPCN2Q8NHX9 752 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 DESI2Q9BSY9 194 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 ZDHHC5Q9C0B5 715 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 AASDHPPTQ9NRN7 309 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 DKK3Q9UBP4 350 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 SEPT3Q9UH03 358 aa20.35■□□□□ 0.85
SS18-218ENST00000581021 GIPC1O14908 333 aa20.34■□□□□ 0.85
SS18-218ENST00000581021 RAD51BO15315 384 aa20.34■□□□□ 0.85
SS18-218ENST00000581021 SLC31A1O15431 190 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms