RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 RSPH9Q9H1X1 276 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-203ENST00000580986 PRSS16Q9NQE7 514 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 SMARCAL1Q9NZC9 954 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 PAK5Q9P286 719 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 NEU2Q9Y3R4 380 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 ARIH1Q9Y4X5 557 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-203ENST00000580986 ACTL7AQ9Y615 435 aa10.54□□□□□ -0.72
CCDC47-203ENST00000580986 CCDC163A0A0D9SF12 145 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 ERI2A8K979 691 aaKnown RBP10.53□□□□□ -0.72
CCDC47-203ENST00000580986 MUSKO15146 869 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 INSIG1O15503 277 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 GPR37L1O60883 481 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 SIN3BO75182 1162 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 ECEL1O95672 775 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 ADH1BP00325 375 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 SERPINF2P08697 491 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 CA4P22748 312 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 CD68P34810 354 aaPredicted RBP10.53□□□□□ -0.72
CCDC47-203ENST00000580986 FDFT1P37268 417 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 COPAP53621 1224 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 SFSWAPQ12872 951 aaKnown RBP10.53□□□□□ -0.72
CCDC47-203ENST00000580986 PARP6Q2NL67 630 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 MYLK3Q32MK0 819 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 TTC27Q6P3X3 843 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 NCEH1Q6PIU2 408 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 DPY19L3Q6ZPD9 716 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 MAATS1Q7Z4T9 603 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 RASSF3Q86WH2 238 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 CCDC89Q8N998 374 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 FAM71DQ8N9W8 422 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 FLCNQ8NFG4 579 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 ARRDC2Q8TBH0 407 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 FAM131CQ96AQ9 280 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 ECHDC3Q96DC8 303 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 FAM129BQ96TA1 746 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 FAM118BQ9BPY3 351 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 TM6SF2Q9BZW4 377 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 ATP13A3Q9H7F0 1226 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 GLOD4Q9HC38 313 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 POLMQ9NP87 494 aaPredicted RBP10.53□□□□□ -0.72
CCDC47-203ENST00000580986 NT5MQ9NPB1 228 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 KLHL8Q9P2G9 620 aaPredicted RBP10.53□□□□□ -0.72
CCDC47-203ENST00000580986 HECAQ9UBI9 543 aaPredicted RBP10.53□□□□□ -0.72
CCDC47-203ENST00000580986 DKK3Q9UBP4 350 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 EBF1Q9UH73 591 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 IL36AQ9UHA7 158 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 PPM1HQ9ULR3 514 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 AAR2Q9Y312 384 aaKnown RBP10.53□□□□□ -0.72
CCDC47-203ENST00000580986 WASF2Q9Y6W5 498 aa10.53□□□□□ -0.72
CCDC47-203ENST00000580986 TSPAN11A1L157 253 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 GOLGA6CA6NDK9 693 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 GOLGA6BA6NDN3 693 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 PRR33A8MZF0 331 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 C1QTNF3-AMACRE9PGA6 284 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 NDC80O14777 642 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 ZBTB24O43167 697 aaPredicted RBP10.52□□□□□ -0.73
CCDC47-203ENST00000580986 HTRA2O43464 458 aaPredicted RBP10.52□□□□□ -0.73
CCDC47-203ENST00000580986 RNASEH1O60930 286 aaKnown RBP10.52□□□□□ -0.73
CCDC47-203ENST00000580986 ANXA9O76027 345 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 ALDH1A2O94788 518 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 PDGFBP01127 241 aaPredicted RBP10.52□□□□□ -0.73
CCDC47-203ENST00000580986 EPOP01588 193 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 IGLV3-19P01714 112 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 GOLGA6DP0CG33 693 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 HLA-EP13747 358 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 C5AR1P21730 350 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 SERPINA4P29622 427 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 RGRP47804 291 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 SUOXP51687 545 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 GDF10P55107 478 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 RPL26P61254 145 aaKnown RBP10.52□□□□□ -0.73
CCDC47-203ENST00000580986 CDK16Q00536 496 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 CCDC15Q0P6D6 951 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 MTAPQ13126 283 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 MPP3Q13368 585 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 SNX1Q13596 522 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 FAM46CQ5VWP2 391 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 ZNF776Q68DI1 518 aaPredicted RBP10.52□□□□□ -0.73
CCDC47-203ENST00000580986 PKN3Q6P5Z2 889 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 BRAT1Q6PJG6 821 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 LEKR1Q6ZMV7 388 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 ARHGEF18Q6ZSZ5 1173 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 PID1Q7Z2X4 250 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 SRLQ86TD4 932 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 PBXIP1Q96AQ6 731 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 PPP1R16AQ96I34 528 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 AGAP3Q96P47 875 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 SEMA3CQ99985 751 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 DDX47Q9H0S4 455 aaKnown RBP10.52□□□□□ -0.73
CCDC47-203ENST00000580986 TNKS2Q9H2K2 1166 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 PRMT8Q9NR22 394 aaPredicted RBP10.52□□□□□ -0.73
CCDC47-203ENST00000580986 EIF2B3Q9NR50 452 aaKnown RBP10.52□□□□□ -0.73
CCDC47-203ENST00000580986 GOLGA6AQ9NYA3 693 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 SEPT10Q9P0V9 454 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 FAM153AQ9UHL3 310 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 RPL26L1Q9UNX3 145 aaKnown RBP10.52□□□□□ -0.73
CCDC47-203ENST00000580986 PLXND1Q9Y4D7 1925 aa10.52□□□□□ -0.73
CCDC47-203ENST00000580986 KMT2EQ8IZD2 1858 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 ANKRD36A6QL64 1941 aa10.51□□□□□ -0.73
CCDC47-203ENST00000580986 CTAGE15A4D2H0 777 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms