RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 NCAPGQ9BPX3 1015 aa13.79□□□□□ -0.2
PGAP3-207ENST00000580898 C1QTNF2Q9BXJ5 285 aa13.79□□□□□ -0.2
PGAP3-207ENST00000580898 GPR27Q9NS67 375 aa13.79□□□□□ -0.2
PGAP3-207ENST00000580898 NDFIP2Q9NV92 336 aa13.79□□□□□ -0.2
PGAP3-207ENST00000580898 LIMA1Q9UHB6 759 aaKnown RBP13.79□□□□□ -0.2
PGAP3-207ENST00000580898 CABIN1Q9Y6J0 2220 aa13.79□□□□□ -0.2
PGAP3-207ENST00000580898 DMXL2Q8TDJ6 3036 aa13.79□□□□□ -0.2
PGAP3-207ENST00000580898 PKD1L2Q7Z442 2459 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 POM121BA6NF01 834 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 IGLON5A6NGN9 336 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 FAM72CH0Y354 149 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 RNF103O00237 685 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 EPHB6O15197 1021 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 FGF10O15520 208 aaPredicted RBP13.78□□□□□ -0.2
PGAP3-207ENST00000580898 TM7SF2O76062 418 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 TMCC1O94876 653 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 CD160O95971 181 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 HOXB3P14651 431 aaPredicted RBP13.78□□□□□ -0.2
PGAP3-207ENST00000580898 ABL2P42684 1182 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 RPIAP49247 311 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 SUOXP51687 545 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 ZNF143P52747 638 aaPredicted RBP13.78□□□□□ -0.2
PGAP3-207ENST00000580898 RHOAP61586 193 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 ELP6Q0PNE2 266 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 PTP4A2Q12974 167 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 FZD2Q14332 565 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 FAM72AQ5TYM5 149 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 FAM72DQ6L9T8 149 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 DCUN1D2Q6PH85 259 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 RBM43Q6ZSC3 357 aaKnown RBP13.78□□□□□ -0.2
PGAP3-207ENST00000580898 MON1BQ7L1V2 547 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 FAM72BQ86X60 149 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 LSMEM2Q8N112 164 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 ZNF548Q8NEK5 533 aaPredicted RBP13.78□□□□□ -0.2
PGAP3-207ENST00000580898 FGF11Q92914 225 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 MCEEQ96PE7 176 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 ERGIC2Q96RQ1 377 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 IL12RB2Q99665 862 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 TTYH3Q9C0H2 523 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 SPASTQ9UBP0 616 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 ACTL7AQ9Y615 435 aa13.78□□□□□ -0.2
PGAP3-207ENST00000580898 K7ESM1 405 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 CCP110O43303 1012 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 AQP9O43315 295 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 CREB3O43889 395 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 OPA1O60313 960 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 BRINP1O60477 761 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 GJB6O95452 261 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 FERP16591 822 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 JUNDP17535 347 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 PFN3P60673 137 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 YPEL5P62699 121 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 FGL2Q14314 439 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 RAB6CQ53S08 254 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 ZNF542PQ5EBM4 170 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 CFAP58Q5T655 872 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 DOCK4Q8N1I0 1966 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 TPCN2Q8NHX9 752 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 MAPK15Q8TD08 544 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 TBATAQ96M53 351 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 UBL7Q96S82 380 aaPredicted RBP13.77□□□□□ -0.21
PGAP3-207ENST00000580898 PCDHB18PQ96TA0 734 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 AGPAT1Q99943 283 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 CNPY3Q9BT09 278 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 RAB6CQ9H0N0 254 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 DKK3Q9UBP4 350 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 SALL4Q9UJQ4 1053 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 NEU3Q9UQ49 428 aa13.77□□□□□ -0.21
PGAP3-207ENST00000580898 WASH4PA8MWX3 477 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 EIF3CLB5ME19 914 aaKnown RBP13.76□□□□□ -0.21
PGAP3-207ENST00000580898 TPP1O14773 563 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 RAD51BO15315 384 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 GKP32189 559 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 BLKP51451 505 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 TPI1P60174 286 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 TBC1D25Q3MII6 688 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 SOWAHCQ53LP3 525 aaPredicted RBP13.76□□□□□ -0.21
PGAP3-207ENST00000580898 ATXN7L2Q5T6C5 722 aaPredicted RBP13.76□□□□□ -0.21
PGAP3-207ENST00000580898 LEKR1Q6ZMV7 388 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 DNAAF5Q86Y56 855 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 WDR48Q8TAF3 677 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 IFI44Q8TCB0 444 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 HCAR2Q8TDS4 363 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 LMX1AQ8TE12 382 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 GRAMD1AQ96CP6 724 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 ZNF578Q96N58 590 aaPredicted RBP13.76□□□□□ -0.21
PGAP3-207ENST00000580898 KLF6Q99612 283 aaPredicted RBP13.76□□□□□ -0.21
PGAP3-207ENST00000580898 EIF3CQ99613 913 aaKnown RBP13.76□□□□□ -0.21
PGAP3-207ENST00000580898 CPEB1Q9BZB8 566 aaKnown RBP13.76□□□□□ -0.21
PGAP3-207ENST00000580898 SLC13A1Q9BZW2 595 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 NAT10Q9H0A0 1025 aaKnown RBP13.76□□□□□ -0.21
PGAP3-207ENST00000580898 UBA2Q9UBT2 640 aaPredicted RBP13.76□□□□□ -0.21
PGAP3-207ENST00000580898 APOBEC3BQ9UH17 382 aaKnown RBP13.76□□□□□ -0.21
PGAP3-207ENST00000580898 FZD10Q9ULW2 581 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 ITM2BQ9Y287 266 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 MFHAS1Q9Y4C4 1052 aa13.76□□□□□ -0.21
PGAP3-207ENST00000580898 KNL1Q8NG31 2342 aa13.75□□□□□ -0.21
PGAP3-207ENST00000580898 LRRC10BA6NIK2 292 aa13.75□□□□□ -0.21
PGAP3-207ENST00000580898 TMEM110-MUSTN1A8MSY1 372 aa13.75□□□□□ -0.21
PGAP3-207ENST00000580898 RASA4BC9J798 803 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms