RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 TMIEQ8NEW7 156 aa15.73■□□□□ 0.11
SS18-216ENST00000580751 PRSS33Q8NF86 280 aa15.73■□□□□ 0.11
SS18-216ENST00000580751 TFB1MQ8WVM0 346 aaKnown RBP15.73■□□□□ 0.11
SS18-216ENST00000580751 C1orf54Q8WWF1 131 aa15.73■□□□□ 0.11
SS18-216ENST00000580751 LRIG1Q96JA1 1093 aa15.73■□□□□ 0.11
SS18-216ENST00000580751 QKIQ96PU8 341 aaKnown RBP eCLIP15.73■□□□□ 0.113e-6■■■■□ 21.4
SS18-216ENST00000580751 FAM129BQ96TA1 746 aa15.73■□□□□ 0.11
SS18-216ENST00000580751 HEPHQ9BQS7 1158 aa15.73■□□□□ 0.11
SS18-216ENST00000580751 TPSD1Q9BZJ3 242 aa15.73■□□□□ 0.11
SS18-216ENST00000580751 RAB17Q9H0T7 212 aa15.73■□□□□ 0.11
SS18-216ENST00000580751 SLC6A17Q9H1V8 727 aa15.73■□□□□ 0.11
SS18-216ENST00000580751 IL36AQ9UHA7 158 aa15.73■□□□□ 0.11
SS18-216ENST00000580751 R3HDM2Q9Y2K5 976 aaKnown RBP15.73■□□□□ 0.11
SS18-216ENST00000580751 PCDHGA2Q9Y5H1 932 aa15.73■□□□□ 0.11
SS18-216ENST00000580751 POP4O95707 220 aaKnown RBP15.72■□□□□ 0.11
SS18-216ENST00000580751 RBP3P10745 1247 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 CCNB1P14635 433 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 C5AR1P21730 350 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 CNR2P34972 360 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 PSMD8P48556 350 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 CSNK1DP48730 415 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 DRG2P55039 364 aaKnown RBP15.72■□□□□ 0.11
SS18-216ENST00000580751 EIF3EP60228 445 aaKnown RBP15.72■□□□□ 0.11
SS18-216ENST00000580751 IFI35P80217 286 aaPredicted RBP15.72■□□□□ 0.11
SS18-216ENST00000580751 DMWDQ09019 674 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 GRM3Q14832 879 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 ATXN7L2Q5T6C5 722 aaPredicted RBP15.72■□□□□ 0.11
SS18-216ENST00000580751 ZC3H18Q86VM9 953 aaKnown RBP15.72■□□□□ 0.11
SS18-216ENST00000580751 KLHL7Q8IXQ5 586 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 TEX26Q8N6G2 289 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 TSEN2Q8NCE0 465 aaKnown RBP15.72■□□□□ 0.11
SS18-216ENST00000580751 ZBTB44Q8NCP5 570 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 GRIN3AQ8TCU5 1115 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 EXOC2Q96KP1 924 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 SPACA7Q96KW9 195 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 MGME1Q9BQP7 344 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 OSBPL1AQ9BXW6 950 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 FAM129AQ9BZQ8 928 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 PABPC3Q9H361 631 aaKnown RBP15.72■□□□□ 0.11
SS18-216ENST00000580751 ZDHHC6Q9H6R6 413 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 USP36Q9P275 1121 aaKnown RBP15.72■□□□□ 0.11
SS18-216ENST00000580751 DNPEPQ9ULA0 475 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 PPM1HQ9ULR3 514 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 ZNF148Q9UQR1 794 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 WASF2Q9Y6W5 498 aa15.72■□□□□ 0.11
SS18-216ENST00000580751 H0Y858 1186 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 KCNK1O00180 336 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 SLC8A1P32418 973 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 PTGIRP43119 386 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 AP1S1P61966 158 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 TCF15Q12870 199 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 MYLK3Q32MK0 819 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 SLC45A4Q5BKX6 768 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 RALGPS1Q5JS13 557 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 TEX35Q5T0J7 233 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 TTC27Q6P3X3 843 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 USP30Q70CQ3 517 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 KBTBD6Q86V97 674 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 C11orf74Q86VG3 221 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 CCDC89Q8N998 374 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 CHST14Q8NCH0 376 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 OR6K2Q8NGY2 324 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 PIP4K2CQ8TBX8 421 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.71■□□□□ 0.11
SS18-216ENST00000580751 RTP4Q96DX8 246 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 PPP1R16AQ96I34 528 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 LRRC1Q9BTT6 524 aa15.71■□□□□ 0.11
SS18-216ENST00000580751 POLR1EQ9GZS1 481 aaKnown RBP15.71■□□□□ 0.11
SS18-216ENST00000580751 RBM22Q9NW64 420 aaKnown RBP eCLIP15.71■□□□□ 0.117e-7■■■□□ 14.8
SS18-216ENST00000580751 UTP11Q9Y3A2 253 aaKnown RBP15.71■□□□□ 0.11
SS18-216ENST00000580751 H7C0C1 242 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 KPNA3O00505 521 aaPredicted RBP15.7■□□□□ 0.1
SS18-216ENST00000580751 MID1O15344 667 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 LEFTY1O75610 366 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 IGLV3-19P01714 112 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 CTSLP07711 333 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 OXTRP30559 389 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 P2RY2P41231 377 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 ATP5OP48047 213 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 TPMTP51580 245 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 CCDC15Q0P6D6 951 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 ARSIQ5FYB1 569 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 WDR93Q6P2C0 686 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 SRLQ86TD4 932 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 LRRN4CLQ8ND94 238 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 GANCQ8TET4 914 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 LRRN4Q8WUT4 740 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 GAB3Q8WWW8 586 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 ATG4AQ8WYN0 398 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 SEC14L1Q92503 715 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 TUBGCP5Q96RT8 1024 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 VAT1Q99536 393 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 IL12RB2Q99665 862 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 CPEB1Q9BZB8 566 aaKnown RBP15.7■□□□□ 0.1
SS18-216ENST00000580751 NT5MQ9NPB1 228 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 ITM2CQ9NQX7 267 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 DYRK4Q9NR20 520 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 SEPT10Q9P0V9 454 aa15.7■□□□□ 0.1
SS18-216ENST00000580751 EVLQ9UI08 416 aaPredicted RBP15.7■□□□□ 0.1
SS18-216ENST00000580751 FZD4Q9ULV1 537 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms