RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 PIGHQ14442 188 aaPredicted RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 PON2Q15165 354 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 SMTNL2Q2TAL5 461 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 FUT11Q495W5 492 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 MPPE1Q53F39 396 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 KCNT1Q5JUK3 1230 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 LRRC38Q5VT99 294 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CC2D1AQ6P1N0 951 aaPredicted RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 DCUN1D2Q6PH85 259 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CHST9Q7L1S5 443 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 POLNQ7Z5Q5 900 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 NT5DC3Q86UY8 548 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CHSY1Q86X52 802 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 PSTKQ8IV42 348 aaKnown RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 APCDD1Q8J025 514 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 LGI2Q8N0V4 545 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CCAR2Q8N163 923 aaKnown RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CFAP52Q8N1V2 620 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CPA6Q8N4T0 437 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 PQLC3Q8N755 202 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 ATP6V0D2Q8N8Y2 350 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 HJURPQ8NCD3 748 aaPredicted RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 PCDH19Q8TAB3 1148 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 FIBINQ8TAL6 211 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 TTC8Q8TAM2 541 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 RAPGEF5Q92565 580 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 ALG3Q92685 438 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 GOLGA1Q92805 767 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 NELL1Q92832 810 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 TTC17Q96AE7 1141 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 NSMCE3Q96MG7 304 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF830Q96NB3 372 aaPredicted RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 BBS2Q9BXC9 721 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 ACE2Q9BYF1 805 aaPredicted RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC2A11Q9BYW1 496 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 OSBPL6Q9BZF3 934 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 SAP130Q9H0E3 1048 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CHRDQ9H2X0 955 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 TMEM245Q9H330 911 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 DEF6Q9H4E7 631 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 WDCPQ9H6R7 721 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 LRRC19Q9H756 370 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 C8orf33Q9H7E9 229 aaPredicted RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 TBC1D17Q9HA65 648 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 PDFQ9HBH1 243 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 ARHGEF4Q9NR80 690 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 RBM12Q9NTZ6 932 aaKnown RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 POLR3BQ9NW08 1133 aaPredicted RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 TMEM51Q9NW97 253 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 TMEM248Q9NWD8 314 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 PLK2Q9NYY3 685 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 MPP6Q9NZW5 540 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CWC15Q9P013 229 aaKnown RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 COX16Q9P0S2 106 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CTTNBP2NLQ9P2B4 639 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 IP6K2Q9UHH9 426 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 LSM7Q9UK45 103 aaKnown RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 PCOLCE2Q9UKZ9 415 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 VANGL2Q9ULK5 521 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 USP18Q9UMW8 372 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 PPP2R2CQ9Y2T4 447 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 ALG6Q9Y672 507 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 TDRD6O60522 2096 aaKnown RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 DMDP11532 3685 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 FRYLO94915 3013 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 LAMA1P25391 3075 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 A0A0D9SEW6 157 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 A0A1W2PQF6 199 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 FAM86C2PA6NEL3 165 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 F5H5T6 163 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 K7ESF4 209 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 MYO1FO00160 1098 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 TMPRSS2O15393 492 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 BUB1O43683 1085 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 TBL1XO60907 577 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 KAT7O95251 611 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 PAPSS2O95340 614 aaPredicted RBP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 MOCS3O95396 460 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ALADP13716 330 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 EDN3P14138 238 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 GOT1P17174 413 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ERCC2P18074 760 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 PRKCHP24723 683 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 GBP1P32455 592 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 HTR7P34969 479 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 PTPN7P35236 360 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ACVRL1P37023 503 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 CSKP41240 450 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 CDKN2BP42772 138 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC1A1P43005 524 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 RPS9P46781 194 aaKnown RBP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 CDH4P55283 916 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 ARF5P84085 180 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 KDSRQ06136 332 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC10A2Q12908 348 aaPredicted RBP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 MTA1Q13330 715 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 KLF1Q13351 362 aaPredicted RBP3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 IHHQ14623 411 aa3.88□□□□□ -1.79
SMARCE1-215ENST00000578995 MESDQ14696 234 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms