RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 WASH3PC4AMC7 463 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 H0Y858 1186 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 INSIG1O15503 277 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ANXA9O76027 345 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ADH1BP00325 375 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 DNTTP04053 509 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 HLA-DQB2P05538 268 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 DCNP07585 359 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ACADMP11310 421 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CXCL12P48061 93 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ZBTB16Q05516 673 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 WASHC5Q12768 1159 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ZBTB17Q13105 803 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 FZD5Q13467 585 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PPP1R7Q15435 360 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SLC14A2Q15849 920 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MYLK3Q32MK0 819 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TTC31Q49AM3 519 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ANKRD20A2Q5SQ80 823 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ANKRD20A1Q5TYW2 823 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ANKRD20A3Q5VUR7 823 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ZNF776Q68DI1 518 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MAMSTRQ6ZN01 415 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 DPY19L3Q6ZPD9 716 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 B4GALNT4Q76KP1 1039 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 KLHL7Q8IXQ5 586 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 NDUFAF2Q8N183 169 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ZNF567Q8N184 647 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CAMKK1Q8N5S9 505 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ZNF366Q8N895 744 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TMIEQ8NEW7 156 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 OR2A12Q8NGT7 310 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 LRRN4Q8WUT4 740 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PRCCQ92733 491 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 RTP4Q96DX8 246 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 EXOC2Q96KP1 924 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SEMA3CQ99985 751 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CEP41Q9BYV8 373 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 DDX47Q9H0S4 455 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SLC25A51Q9H1U9 297 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 GLOD4Q9HC38 313 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 VPS45Q9NRW7 570 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SPATA6Q9NWH7 488 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 HCN2Q9UL51 889 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SCML1Q9UN30 329 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 AAR2Q9Y312 384 aaKnown RBP11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CACNA1AO00555 2505 aa11.42□□□□□ -0.58
CDK5RAP3-210ENST00000578733 EML5Q05BV3 1969 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PTPRZ1P23471 2315 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 E7EVH7 732 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PSMD3O43242 534 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 LAMTOR5O43504 91 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ADAM23O75077 832 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SOCS5O75159 536 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PDGFBP01127 241 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 IL1BP01584 269 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 NFKB1P19838 968 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 XPAP23025 273 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 FDFT1P37268 417 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 KCNJ1P48048 391 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 LMAN1P49257 510 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 GEMP55040 296 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MAXP61244 160 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 POLR2LP62875 67 aaKnown RBP11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 DR1Q01658 176 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MPP3Q13368 585 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PARP6Q2NL67 630 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ATXN7L2Q5T6C5 722 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 C9orf64Q5T6V5 341 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ALG1LQ6GMV1 187 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 STK40Q8N2I9 435 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PGBD3Q8N328 593 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CCDC110Q8TBZ0 833 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ZNF641Q96N77 438 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 FCRL5Q96RD9 977 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 RSPH9Q9H1X1 276 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 GBA3Q9H227 469 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 L2HGDHQ9H9P8 463 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 USP29Q9HBJ7 922 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PCDH9Q9HC56 1237 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PRSS16Q9NQE7 514 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PCYOX1Q9UHG3 505 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 EVLQ9UI08 416 aaPredicted RBP11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 NCKAP1Q9Y2A7 1128 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ACTL7AQ9Y615 435 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 DCHS1Q96JQ0 3298 aa11.41□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CACNA1IQ9P0X4 2223 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 VPS13AQ96RL7 3174 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 A0A1W2PQF6 199 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ERI2A8K979 691 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PDE2AO00408 941 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 KPNA3O00505 521 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ZNF821O75541 412 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PAPSS2O95340 614 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 APBB3O95704 486 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 KRT14P02533 472 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CR2P20023 1033 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 C5AR1P21730 350 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CD86P42081 329 aa11.4□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ID4P47928 161 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms