RNA–Protein interactions for RNA: ENST00000577681.1

CCL13-202, Transcript of C-C motif chemokine ligand 13, humanhuman

TSL 1 (best)

Gene CCL13, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-202ENST00000577681 LONRF2Q1L5Z9 754 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 MYLK3Q32MK0 819 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 FNDC3BQ53EP0 1204 aaKnown RBP8.11□□□□□ -1.11
CCL13-202ENST00000577681 LINGO4Q6UY18 593 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 C4orf22Q6V702 233 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 SYT10Q6XYQ8 523 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 Q6ZS52 159 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 DSG4Q86SJ6 1040 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 PGBD5Q8N414 524 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 CNTD1Q8N815 330 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 DTWD2Q8NBA8 298 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 HTR3CQ8WXA8 447 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 ZNF419Q96HQ0 510 aaPredicted RBP8.11□□□□□ -1.11
CCL13-202ENST00000577681 ZNF641Q96N77 438 aaPredicted RBP8.11□□□□□ -1.11
CCL13-202ENST00000577681 CNTNAP3BQ96NU0 1288 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 PPP1R2P1Q96PQ5 205 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 NUDCD1Q96RS6 583 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 FERMT1Q9BQL6 677 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 OSBPL1AQ9BXW6 950 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 CNTNAP3Q9BZ76 1288 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 POLMQ9NP87 494 aaPredicted RBP8.11□□□□□ -1.11
CCL13-202ENST00000577681 CACNA2D2Q9NY47 1150 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 DKK3Q9UBP4 350 aa8.11□□□□□ -1.11
CCL13-202ENST00000577681 FEZ2Q9UHY8 353 aaPredicted RBP8.11□□□□□ -1.11
CCL13-202ENST00000577681 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 TSPAN11A1L157 253 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 ESPNB1AK53 854 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 MUSKO15146 869 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 HTRA2O43464 458 aaPredicted RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 SYNCRIPO60506 623 aaKnown RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 OPHN1O60890 802 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 SOCS5O75159 536 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 SIN3BO75182 1162 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 APBB3O95704 486 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 IGSF6O95976 241 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 EPOP01588 193 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 PRNPP04156 253 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 EPHX1P07099 455 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 DCNP07585 359 aaKnown RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 PTPN3P26045 913 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 RBL1P28749 1068 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 DEKP35659 375 aaKnown RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 PAFAH1B1P43034 410 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 CCNHP51946 323 aaPredicted RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 SEC13P55735 322 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 SFSWAPQ12872 951 aaKnown RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 ZBTB17Q13105 803 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 P3H1Q32P28 736 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 CCDC181Q5TID7 509 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 HEATR6Q6AI08 1181 aaKnown RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 KIAA1211LQ6NV74 962 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 NCEH1Q6PIU2 408 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 DPY19L3Q6ZPD9 716 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 USP30Q70CQ3 517 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 SRLQ86TD4 932 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 ZC3H18Q86VM9 953 aaKnown RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 C1orf210Q8IVY1 113 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 MAML2Q8IZL2 1156 aaPredicted RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 TSEN2Q8NCE0 465 aaKnown RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 CCNYQ8ND76 341 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 ATL2Q8NHH9 583 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 KIF18AQ8NI77 898 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 ARRDC2Q8TBH0 407 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 OR8D1Q8WZ84 308 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 ECHDC3Q96DC8 303 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 IMP4Q96G21 291 aaKnown RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 MS4A14Q96JA4 679 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 MRGPRX1Q96LB2 322 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 C16orf45Q96MC5 204 aaPredicted RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 GDAP1L1Q96MZ0 367 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 SPATA13Q96N96 652 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 RUNDC3BQ96NL0 473 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 FCRL5Q96RD9 977 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 HEPHQ9BQS7 1158 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 CINPQ9BW66 212 aaPredicted RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 POLR1EQ9GZS1 481 aaKnown RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 SLC25A51Q9H1U9 297 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 ITM2CQ9NQX7 267 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 VPS45Q9NRW7 570 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 RBM22Q9NW64 420 aaKnown RBP eCLIP8.1□□□□□ -1.11
CCL13-202ENST00000577681 USP36Q9P275 1121 aaKnown RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 PCYOX1Q9UHG3 505 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 CDC23Q9UJX2 597 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 DNPEPQ9ULA0 475 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 FCF1Q9Y324 198 aaKnown RBP8.1□□□□□ -1.11
CCL13-202ENST00000577681 PPIL1Q9Y3C6 166 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 NEU2Q9Y3R4 380 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 ACTL7AQ9Y615 435 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 WASF2Q9Y6W5 498 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 R4GN57 208 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 ACACBO00763 2458 aa8.1□□□□□ -1.11
CCL13-202ENST00000577681 SPAG17Q6Q759 2223 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 GOLGA6L10A0A0M3HER8 536 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 H7C0C1 242 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 KCNK1O00180 336 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 RNF103O00237 685 aa8.09□□□□□ -1.11
CCL13-202ENST00000577681 PDE2AO00408 941 aaPredicted RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 TRAFD1O14545 582 aaPredicted RBP8.09□□□□□ -1.11
CCL13-202ENST00000577681 ZNF185O15231 689 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms