RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 ITGB7P26010 798 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 MAXP61244 160 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 SFSWAPQ12872 951 aaKnown RBP20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 ZBTB17Q13105 803 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 IHHQ14623 411 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 ZNF805Q5CZA5 627 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 FAM182AQ5T1J6 154 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 AGBL4Q5VU57 503 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 ALG1LQ6GMV1 187 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 NCEH1Q6PIU2 408 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 GDPD4Q6W3E5 623 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 CEP68Q76N32 757 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 SLC13A5Q86YT5 568 aaPredicted RBP20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 NUDCD1Q96RS6 583 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 BTBD1Q9H0C5 482 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 NT5MQ9NPB1 228 aa20.25■□□□□ 0.83
SUPT4H1-202ENST00000577396 UGT2B4P06133 528 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 PIP5KL1Q5T9C9 394 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 CCDC181Q5TID7 509 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 PMS2CLQ68D20 193 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 ERN2Q76MJ5 926 aaKnown RBP20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 GANCQ8TET4 914 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 ZNF641Q96N77 438 aaPredicted RBP20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 KLHL32Q96NJ5 620 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 TUBGCP5Q96RT8 1024 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 SUV39H2Q9H5I1 410 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 SGK2Q9HBY8 427 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 NOD2Q9HC29 1040 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 R3HDM2Q9Y2K5 976 aaKnown RBP20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 SLC7A4O43246 635 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 MAP3K13O43283 966 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 PIGNO95427 931 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 ATP1A1P05023 1023 aaKnown RBP20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 HLA-DQB2P05538 268 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 CXCR5P32302 372 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 TAS2R38P59533 333 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 AP1S1P61966 158 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 WASHC5Q12768 1159 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 GRM3Q14832 879 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 SLC45A4Q5BKX6 768 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 RALGPS1Q5JS13 557 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 SPDYCQ5MJ68 293 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 SEL1L2Q5TEA6 688 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 CAMK1DQ8IU85 385 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 TMEFF1Q8IYR6 380 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 TTC13Q8NBP0 860 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 ARRDC2Q8TBH0 407 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 QKIQ96PU8 341 aaKnown RBP eCLIP20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 FAM118BQ9BPY3 351 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 GPR174Q9BXC1 333 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 C10orf88Q9H8K7 445 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 DKK3Q9UBP4 350 aa20.24■□□□□ 0.83
SUPT4H1-202ENST00000577396 ZFHX2Q9C0A1 2572 aaPredicted RBP20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 C16orf96A6NNT2 1141 aa20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 TRAFD1O14545 582 aaPredicted RBP20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 MAPK8P45983 427 aa20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 ADPRHP54922 357 aa20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 EIF3EP60228 445 aaKnown RBP20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 RPL6Q02878 288 aaKnown RBP20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 NIPAL4Q0D2K0 466 aa20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 TEX44Q53QW1 395 aa20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 PRR23BQ6ZRT6 265 aa20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 PARS2Q7L3T8 475 aaKnown RBP20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 C17orf53Q8N3J3 647 aaPredicted RBP20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 CADM4Q8NFZ8 388 aa20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 HCAR2Q8TDS4 363 aa20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 ECHDC3Q96DC8 303 aa20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 PPP1R16AQ96I34 528 aa20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 SEMA3CQ99985 751 aa20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 POLR1EQ9GZS1 481 aaKnown RBP20.23■□□□□ 0.83
SUPT4H1-202ENST00000577396 PLRG1O43660 514 aaKnown RBP20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 RBP3P10745 1247 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 MSNP26038 577 aaKnown RBP20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 PTPN3P26045 913 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 RBL1P28749 1068 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 LPCAT2Q7L5N7 544 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 SLC41A1Q8IVJ1 513 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 SLC35B2Q8TB61 432 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 HTR3CQ8WXA8 447 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 TEKT5Q96M29 485 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 WDR24Q96S15 920 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 CEP41Q9BYV8 373 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 ATP13A3Q9H7F0 1226 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 USP29Q9HBJ7 922 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 SCUBE2Q9NQ36 999 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 SMG5Q9UPR3 1016 aaKnown RBP20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 THADAQ6YHU6 1953 aa20.22■□□□□ 0.83
SUPT4H1-202ENST00000577396 TSPAN11A1L157 253 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 H7C0C1 242 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 MTSS1O43312 755 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 HTRA2O43464 458 aaPredicted RBP20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 NDUFS2O75306 463 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 RHOBTB1O94844 696 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 SEMA4FO95754 770 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 TIMP2P16035 220 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 CES1P23141 567 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 PTGER3P43115 390 aa20.21■□□□□ 0.83
SUPT4H1-202ENST00000577396 ATP5OP48047 213 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms