RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 SGCGQ13326 291 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 SLC14A1Q13336 389 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 RFTN1Q14699 578 aaPredicted RBP15.46■□□□□ 0.07
SMG6-220ENST00000576218 SUZ12Q15022 739 aaKnown RBP15.46■□□□□ 0.07
SMG6-220ENST00000576218 CYTH1Q15438 398 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 TMCO4Q5TGY1 634 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 KIAA1161Q6NSJ0 714 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 ARHGAP36Q6ZRI8 547 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 TTC7BQ86TV6 843 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 GAS2L3Q86XJ1 694 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 ARHGAP12Q8IWW6 846 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 CCDC170Q8IYT3 715 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 C1orf216Q8TAB5 229 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.46■□□□□ 0.07
SMG6-220ENST00000576218 RAB7BQ96AH8 199 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 FAM131CQ96AQ9 280 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 ZNF830Q96NB3 372 aaPredicted RBP15.46■□□□□ 0.07
SMG6-220ENST00000576218 PDFQ9HBH1 243 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 GDF3Q9NR23 364 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 TM7SF3Q9NS93 570 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 LHX3Q9UBR4 397 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 SEPT3Q9UH03 358 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 INTUQ9ULD6 942 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 MFHAS1Q9Y4C4 1052 aa15.46■□□□□ 0.07
SMG6-220ENST00000576218 MED19A0JLT2 244 aaPredicted RBP15.45■□□□□ 0.06
SMG6-220ENST00000576218 RNF103O00237 685 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 PIGNO95427 931 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 CSRP1P21291 193 aaKnown RBP15.45■□□□□ 0.06
SMG6-220ENST00000576218 SERPINA4P29622 427 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 NAP1L1P55209 391 aaKnown RBP15.45■□□□□ 0.06
SMG6-220ENST00000576218 TAS2R40P59535 323 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 DPYSL3Q14195 570 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 LBRQ14739 615 aaKnown RBP15.45■□□□□ 0.06
SMG6-220ENST00000576218 INAVAQ3KP66 663 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 ATP13A4Q4VNC1 1196 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 LRRC73Q5JTD7 316 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 AFMIDQ63HM1 303 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 SEL1L3Q68CR1 1132 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 CPNE8Q86YQ8 564 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 NAXDQ8IW45 347 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 CXorf40AQ8TE69 158 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 PANX2Q96RD6 677 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 ZNF670Q9BS34 389 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 MAK16Q9BXY0 300 aaKnown RBP15.45■□□□□ 0.06
SMG6-220ENST00000576218 ATP13A3Q9H7F0 1226 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 EBF2Q9HAK2 575 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 IL21RQ9HBE5 538 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 ETNK2Q9NVF9 386 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 HAUS2Q9NVX0 235 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 FNDC3AQ9Y2H6 1198 aaKnown RBP15.45■□□□□ 0.06
SMG6-220ENST00000576218 CHD5Q8TDI0 1954 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 PCDH15Q96QU1 1955 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 LAMA1P25391 3075 aa15.45■□□□□ 0.06
SMG6-220ENST00000576218 CACNA1EQ15878 2313 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 KCNK3O14649 394 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 INSIG1O15503 277 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 TSPAN6O43657 245 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 DFNA5O60443 496 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 KRT1P04264 644 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 CD48P09326 243 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 CEACAM1P13688 526 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 HNRNPA2B1P22626 353 aaKnown RBP15.44■□□□□ 0.06
SMG6-220ENST00000576218 SLC1A1P43005 524 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 ARRB1P49407 418 aaPredicted RBP15.44■□□□□ 0.06
SMG6-220ENST00000576218 SCNN1BP51168 640 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 IL9RQ01113 521 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 BCL2L1Q07817 233 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 ANKRD20A8PQ5CZ79 823 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 ERAP2Q6P179 960 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 SRLQ86TD4 932 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 ZSCAN30Q86W11 494 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 TMTC1Q8IUR5 882 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 TSEN2Q8NCE0 465 aaKnown RBP15.44■□□□□ 0.06
SMG6-220ENST00000576218 ZNF599Q96NL3 588 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 TUBGCP5Q96RT8 1024 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 ORAI3Q9BRQ5 295 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 FZD3Q9NPG1 666 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 ITM2BQ9Y287 266 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 TTLL3Q9Y4R7 772 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 FADS3Q9Y5Q0 445 aa15.44■□□□□ 0.06
SMG6-220ENST00000576218 H0Y8X5 98 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 TLR4O00206 839 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 TM4SF5O14894 197 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 AP1G1O43747 822 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 MFSD11O43934 449 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 MTA2O94776 668 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 HSPA9P38646 679 aaKnown RBP15.43■□□□□ 0.06
SMG6-220ENST00000576218 ABL2P42684 1182 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 CTSKP43235 329 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 BNC1Q01954 994 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 ITKQ08881 620 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 ELP6Q0PNE2 266 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 HNRNPDQ14103 355 aaKnown RBP15.43■□□□□ 0.06
SMG6-220ENST00000576218 ZNF284Q2VY69 593 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 PTAR1Q7Z6K3 402 aaPredicted RBP15.43■□□□□ 0.06
SMG6-220ENST00000576218 TP53INP2Q8IXH6 220 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 RHOT1Q8IXI2 618 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 MFSD2AQ8NA29 543 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 SPC24Q8NBT2 197 aa15.43■□□□□ 0.06
SMG6-220ENST00000576218 TSC1Q92574 1164 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms