RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 ANAPC2Q9UJX6 822 aa16.54■□□□□ 0.24
CTDNEP1-211ENST00000575783 RNF215Q9Y6U7 377 aa16.54■□□□□ 0.24
CTDNEP1-211ENST00000575783 TEP1Q99973 2627 aaKnown RBP16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 C16orf96A6NNT2 1141 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 GRAP2O75791 330 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 ALPIP09923 528 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 GKP32189 559 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 IGFALSP35858 605 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 ABL2P42684 1182 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 CCR10P46092 362 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 BLKP51451 505 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 CCNHP51946 323 aaPredicted RBP16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 TMEM164Q5U3C3 297 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 LVRNQ6Q4G3 990 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 MACC1Q6ZN28 852 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 RYBPQ8N488 228 aaPredicted RBP16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 OR7D4Q8NG98 312 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 SLC35C1Q96A29 364 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 MBNL1Q9NR56 388 aaKnown RBP16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 KCNK4Q9NYG8 393 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 ARMCX3Q9UH62 379 aaPredicted RBP16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 RCOR1Q9UKL0 485 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 CFAP45Q9UL16 551 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 SNX10Q9Y5X0 201 aa16.53■□□□□ 0.24
CTDNEP1-211ENST00000575783 ENO4A6NNW6 628 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 SLC16A3O15427 465 aaKnown RBP16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 KRT5P13647 590 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 CMA1P23946 247 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 CD82P27701 267 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 HK3P52790 923 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 C5orf22Q49AR2 442 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 ERICH6BQ5W0A0 696 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 RETSATQ6NUM9 610 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 SETD3Q86TU7 594 aaPredicted RBP16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 GKN2Q86XP6 184 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 PCDH20Q8N6Y1 951 aaKnown RBP16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 OR6C4Q8NGE1 309 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 OR6K2Q8NGY2 324 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 RAB7BQ96AH8 199 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 SLC2A13Q96QE2 648 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 EDEM3Q9BZQ6 932 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 METTL14Q9HCE5 456 aaKnown RBP16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 MPP6Q9NZW5 540 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 HECAQ9UBI9 543 aaPredicted RBP16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 TUBD1Q9UJT1 453 aa16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 FCF1Q9Y324 198 aaKnown RBP16.52■□□□□ 0.24
CTDNEP1-211ENST00000575783 TRPM6Q9BX84 2022 aa16.52■□□□□ 0.23
CTDNEP1-211ENST00000575783 STMND1H3BQB6 276 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 MMP20O60882 483 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 LETM1O95202 739 aaPredicted RBP16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 OR1E1P30953 314 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 SYKP43405 635 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 FMO5P49326 533 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 SERPINH1P50454 418 aaKnown RBP16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 ATP1A2P50993 1020 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 DNM1Q05193 864 aaKnown RBP16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 MTA1Q13330 715 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 LRRC73Q5JTD7 316 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 TMPRSS9Q7Z410 1059 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 ARHGEF19Q8IW93 802 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 IL22RA1Q8N6P7 574 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 NKD1Q969G9 470 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 TSG101Q99816 390 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 TM6SF2Q9BZW4 377 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 CEP44Q9C0F1 390 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 SEMA6CQ9H3T2 930 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 HPSEQ9Y251 543 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 ACTL7AQ9Y615 435 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 CREBBPQ92793 2442 aa16.51■□□□□ 0.23
CTDNEP1-211ENST00000575783 SPENQ96T58 3664 aaKnown RBP16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 MED7O43513 233 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 ZSCAN22P10073 491 aaPredicted RBP16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 CCL4P13236 92 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 NDUFA8P51970 172 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 FKBP3Q00688 224 aaKnown RBP16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 SLC20A2Q08357 652 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 PDCLQ13371 301 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 ALG11Q2TAA5 492 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 ZNF805Q5CZA5 627 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 EFHC1Q5JVL4 640 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 ANKRD40Q6AI12 368 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 ENPP7Q6UWV6 458 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 LRRC31Q6UY01 552 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 NYAP1Q6ZVC0 841 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 TTC7BQ86TV6 843 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 C9orf43Q8TAL5 461 aaPredicted RBP16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 C1QTNF7Q9BXJ2 289 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 TKTL2Q9H0I9 626 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 ATP13A1Q9HD20 1204 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 AKAP7Q9P0M2 348 aaPredicted RBP16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 PLEKHB1Q9UF11 243 aaPredicted RBP16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 APPL1Q9UKG1 709 aa16.5■□□□□ 0.23
CTDNEP1-211ENST00000575783 ZFC3H1O60293 1989 aaKnown RBP16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 KRIT1O00522 736 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 HSF2BPO75031 334 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 TM7SF2O76062 418 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 RASGRP1O95267 797 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 F13A1P00488 732 aa16.49■□□□□ 0.23
CTDNEP1-211ENST00000575783 GLI1P08151 1106 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms