RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 MAATS1Q7Z4T9 603 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 TRIM69Q86WT6 500 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 DNAAF5Q86Y56 855 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 IFT20Q8IY31 132 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 TMIEQ8NEW7 156 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 PIP4K2CQ8TBX8 421 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 GANCQ8TET4 914 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 FAM172AQ8WUF8 416 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.79□□□□□ -0.68
LITAF-216ENST00000574848 TMEM121BQ9BXQ6 578 aaPredicted RBP10.79□□□□□ -0.68
LITAF-216ENST00000574848 ACE2Q9BYF1 805 aaPredicted RBP10.79□□□□□ -0.68
LITAF-216ENST00000574848 TM7SF3Q9NS93 570 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 TMEM248Q9NWD8 314 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 OR12D3Q9UGF7 316 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 PCOLCE2Q9UKZ9 415 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 ANKRD6Q9Y2G4 727 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 SNX11Q9Y5W9 270 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 USP24Q9UPU5 2620 aa10.79□□□□□ -0.68
LITAF-216ENST00000574848 MAP1BP46821 2468 aaKnown RBP10.79□□□□□ -0.68
LITAF-216ENST00000574848 FRYQ5TBA9 3013 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 SPAARA0A1B0GVQ0 90 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 A0A1W2PR77 199 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 FAM72CH0Y354 149 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 K7ERQ8 282 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 DDX3YO15523 660 aaKnown RBP10.78□□□□□ -0.68
LITAF-216ENST00000574848 ATMINO43313 823 aaPredicted RBP10.78□□□□□ -0.68
LITAF-216ENST00000574848 SMAD6O43541 496 aaKnown RBP10.78□□□□□ -0.68
LITAF-216ENST00000574848 PCDHGA12O60330 932 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 DFNA5O60443 496 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 LRIG2O94898 1065 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 RHOQP17081 205 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 DESP17661 470 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 COMTP21964 271 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 RRM1P23921 792 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 CCT8P50990 548 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 PPP2CBP62714 309 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 PPP2CAP67775 309 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 FAM193AP78312 1265 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 SIM1P81133 766 aaPredicted RBP10.78□□□□□ -0.68
LITAF-216ENST00000574848 ARF5P84085 180 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 SLC20A2Q08357 652 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 CNTN1Q12860 1018 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 LONRF2Q1L5Z9 754 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 ACCSLQ4AC99 568 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 PIP5KL1Q5T9C9 394 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 FAM72AQ5TYM5 149 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 NAPEPLDQ6IQ20 393 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 PLEKHA7Q6IQ23 1121 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 FAM72DQ6L9T8 149 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 RETSATQ6NUM9 610 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 DNAJC24Q6P3W2 148 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 HDXQ7Z353 690 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 FAM72BQ86X60 149 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 PCDH20Q8N6Y1 951 aaKnown RBP10.78□□□□□ -0.68
LITAF-216ENST00000574848 CCDC185Q8N715 623 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 EIF1ADQ8N9N8 165 aaKnown RBP10.78□□□□□ -0.68
LITAF-216ENST00000574848 ATP11CQ8NB49 1132 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 OR7D4Q8NG98 312 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 OR14C36Q8NHC7 312 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 ISG20Q96AZ6 181 aaKnown RBP10.78□□□□□ -0.68
LITAF-216ENST00000574848 TBC1D31Q96DN5 1066 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 MS4A14Q96JA4 679 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 SLC6A18Q96N87 628 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 GOLPH3Q9H4A6 298 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 PREBQ9HCU5 417 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 ATP13A1Q9HD20 1204 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 OGFRQ9NZT2 677 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 IP6K2Q9UHH9 426 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 DMTF1Q9Y222 760 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 NEUROG3Q9Y4Z2 214 aa10.78□□□□□ -0.68
LITAF-216ENST00000574848 FAM221BA6H8Z2 402 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 FAM47DPA6NHR8 397 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 PSTPIP1O43586 416 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 PROSCO94903 275 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 DKK1O94907 266 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 ZRANB2O95218 330 aaKnown RBP eCLIP10.77□□□□□ -0.69
LITAF-216ENST00000574848 CD160O95971 181 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 FGGP02679 453 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 PRNPP04156 253 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 WNT1P04628 370 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 GLDCP23378 1020 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 CD38P28907 300 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 L1CAMP32004 1257 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 CHRNA3P32297 505 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 TAS2R38P59533 333 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 RPL7AP62424 266 aaKnown RBP10.77□□□□□ -0.69
LITAF-216ENST00000574848 VSNL1P62760 191 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 FOXC1Q12948 553 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 TRIP6Q15654 476 aaKnown RBP10.77□□□□□ -0.69
LITAF-216ENST00000574848 KCNT1Q5JUK3 1230 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 NEK5Q6P3R8 708 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 LAYNQ6UX15 382 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 LINGO4Q6UY18 593 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.77□□□□□ -0.69
LITAF-216ENST00000574848 RAB44Q7Z6P3 723 aaPredicted RBP10.77□□□□□ -0.69
LITAF-216ENST00000574848 PHLDB2Q86SQ0 1253 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 IQCHQ86VS3 1027 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 PLPP6Q8IY26 295 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 KRT222Q8N1A0 295 aa10.77□□□□□ -0.69
LITAF-216ENST00000574848 ARHGEF2Q92974 986 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms