RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 ARFGAP1Q8N6T3 406 aa16.73■□□□□ 0.27
TVP23B-206ENST00000574226 DENND6BQ8NEG7 585 aa16.73■□□□□ 0.27
TVP23B-206ENST00000574226 GATA6Q92908 595 aa16.73■□□□□ 0.27
TVP23B-206ENST00000574226 C1QTNF7Q9BXJ2 289 aa16.73■□□□□ 0.27
TVP23B-206ENST00000574226 C1QTNF2Q9BXJ5 285 aa16.73■□□□□ 0.27
TVP23B-206ENST00000574226 KLHL11Q9NVR0 708 aa16.73■□□□□ 0.27
TVP23B-206ENST00000574226 IFNKQ9P0W0 207 aa16.73■□□□□ 0.27
TVP23B-206ENST00000574226 MYO1AQ9UBC5 1043 aa16.73■□□□□ 0.27
TVP23B-206ENST00000574226 LCMT1Q9UIC8 334 aa16.73■□□□□ 0.27
TVP23B-206ENST00000574226 ZFR2Q9UPR6 939 aaKnown RBP16.73■□□□□ 0.27
TVP23B-206ENST00000574226 PCDHGA1Q9Y5H4 931 aa16.73■□□□□ 0.27
TVP23B-206ENST00000574226 ACTL7AQ9Y615 435 aa16.73■□□□□ 0.27
TVP23B-206ENST00000574226 KNTC1P50748 2209 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 PRAMEF11O60813 436 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 TOP3BO95985 862 aaKnown RBP16.72■□□□□ 0.27
TVP23B-206ENST00000574226 ATXN1LP0C7T5 689 aaKnown RBP16.72■□□□□ 0.27
TVP23B-206ENST00000574226 PRLRP16471 622 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 SPINK2P20155 84 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 ARL4AP40617 200 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 IL9RQ01113 521 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 TRIM14Q14142 442 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 RFTN1Q14699 578 aaPredicted RBP16.72■□□□□ 0.27
TVP23B-206ENST00000574226 SHBQ15464 509 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 HS1BP3Q53T59 392 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 PPP6R3Q5H9R7 873 aaPredicted RBP16.72■□□□□ 0.27
TVP23B-206ENST00000574226 PRAMEF14Q5SWL7 426 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 TTC7BQ86TV6 843 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 NIPA2Q8N8Q9 360 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 OR6K2Q8NGY2 324 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 CPLX3Q8WVH0 158 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 ZNF641Q96N77 438 aaPredicted RBP16.72■□□□□ 0.27
TVP23B-206ENST00000574226 KLHL32Q96NJ5 620 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 TUBGCP5Q96RT8 1024 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 TOR4AQ9NXH8 423 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 IP6K2Q9UHH9 426 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 KLK13Q9UKR3 277 aa16.72■□□□□ 0.27
TVP23B-206ENST00000574226 ARID1BQ8NFD5 2236 aaPredicted RBP16.72■□□□□ 0.27
TVP23B-206ENST00000574226 H3BRJ5 948 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 TOR1BO14657 336 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 FPGTO14772 594 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 AREL1O15033 823 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 LDOC1O95751 146 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-206ENST00000574226 GYPCP04921 128 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 ERCC2P18074 760 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 HNRNPH3P31942 346 aaKnown RBP16.71■□□□□ 0.27
TVP23B-206ENST00000574226 RABIFP47224 123 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 CSNK1DP48730 415 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 ELP6Q0PNE2 266 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 DPYSL2Q16555 572 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 ATXN7L2Q5T6C5 722 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-206ENST00000574226 AFMIDQ63HM1 303 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 SEL1L3Q68CR1 1132 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 ALKBH5Q6P6C2 394 aaKnown RBP16.71■□□□□ 0.27
TVP23B-206ENST00000574226 KYAT3Q6YP21 454 aaKnown RBP16.71■□□□□ 0.27
TVP23B-206ENST00000574226 LEKR1Q6ZMV7 388 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 TMPRSS7Q7RTY8 843 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 GATAD2AQ86YP4 633 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 TEKT4Q8WW24 435 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 KLK6Q92876 244 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 PEBP4Q96S96 227 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 KCTD15Q96SI1 283 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-206ENST00000574226 TMEM121BQ9BXQ6 578 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-206ENST00000574226 TRIM7Q9C029 511 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 KLC2Q9H0B6 622 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 PDFQ9HBH1 243 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 GPATCH2LQ9NWQ4 482 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 AKAP13Q12802 2813 aa16.71■□□□□ 0.27
TVP23B-206ENST00000574226 PTPRBP23467 1997 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 C1QTNF9BB2RNN3 333 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 MYO1FO00160 1098 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 RNF103O00237 685 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 ENC1O14682 589 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 RIOK3O14730 519 aaKnown RBP16.7■□□□□ 0.26
TVP23B-206ENST00000574226 PAK4O96013 591 aaPredicted RBP16.7■□□□□ 0.26
TVP23B-206ENST00000574226 CYP1A2P05177 515 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 TPM1P09493 284 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 C1QTNF9P0C862 333 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 XPAP23025 273 aaPredicted RBP16.7■□□□□ 0.26
TVP23B-206ENST00000574226 GKP32189 559 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 PAPOLAP51003 745 aaKnown RBP16.7■□□□□ 0.26
TVP23B-206ENST00000574226 RENBPP51606 427 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 IL10RBQ08334 325 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 NSUN2Q08J23 767 aaKnown RBP eCLIP16.7■□□□□ 0.26
TVP23B-206ENST00000574226 ILKQ13418 452 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 CYTH1Q15438 398 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 NFKBIBQ15653 356 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 CA9Q16790 459 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 TSR1Q2NL82 804 aaKnown RBP16.7■□□□□ 0.26
TVP23B-206ENST00000574226 CFAP58Q5T655 872 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 BRAT1Q6PJG6 821 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 CCNI2Q6ZMN8 369 aaPredicted RBP16.7■□□□□ 0.26
TVP23B-206ENST00000574226 GCNT7Q6ZNI0 430 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 CYP4V2Q6ZWL3 525 aaPredicted RBP16.7■□□□□ 0.26
TVP23B-206ENST00000574226 PNPLA1Q8N8W4 532 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 CNDP2Q96KP4 475 aaKnown RBP16.7■□□□□ 0.26
TVP23B-206ENST00000574226 ZNF599Q96NL3 588 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 CALN1Q9BXU9 219 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 SLC39A8Q9C0K1 460 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 SP110Q9HB58 689 aa16.7■□□□□ 0.26
TVP23B-206ENST00000574226 CWC15Q9P013 229 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms