RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TRIM67Q6ZTA4 783 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 LINC00523Q86TU6 105 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 ZMIZ2Q8NF64 920 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 PGAP3Q96FM1 320 aaPredicted RBP19.28■□□□□ 0.68
SCARF1-206ENST00000573852 ZNF419Q96HQ0 510 aaPredicted RBP19.28■□□□□ 0.68
SCARF1-206ENST00000573852 SEMA6AQ9H2E6 1030 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 MRPL46Q9H2W6 279 aaKnown RBP19.28■□□□□ 0.68
SCARF1-206ENST00000573852 POMKQ9H5K3 350 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 WDCPQ9H6R7 721 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 HSFX1Q9UBD0 423 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 C7orf72A4D263 438 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 E7ENX8 843 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 GABRDO14764 452 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 TRPA1O75762 1119 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 TAS2R39P59534 338 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 CREB5Q02930 508 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 AMIGO2Q86SJ2 522 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 HEXDCQ8WVB3 486 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 ASB9Q96DX5 294 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 TBL1YQ9BQ87 522 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 MRPL1Q9BYD6 325 aaKnown RBP19.28■□□□□ 0.68
SCARF1-206ENST00000573852 TNFRSF12AQ9NP84 129 aa19.28■□□□□ 0.68
SCARF1-206ENST00000573852 TRPC5OSA6NMA1 111 aa19.27■□□□□ 0.68
SCARF1-206ENST00000573852 CACNG3O60359 315 aa19.27■□□□□ 0.68
SCARF1-206ENST00000573852 HOXD8P13378 290 aaPredicted RBP19.27■□□□□ 0.68
SCARF1-206ENST00000573852 HDCP19113 662 aa19.27■□□□□ 0.68
SCARF1-206ENST00000573852 DNAJB1P25685 340 aa19.27■□□□□ 0.68
SCARF1-206ENST00000573852 SLC1A2P43004 574 aa19.27■□□□□ 0.68
SCARF1-206ENST00000573852 UGP2Q16851 508 aa19.27■□□□□ 0.68
SCARF1-206ENST00000573852 DENND5AQ6IQ26 1287 aa19.27■□□□□ 0.68
SCARF1-206ENST00000573852 FASTKD5Q7L8L6 764 aaKnown RBP19.27■□□□□ 0.68
SCARF1-206ENST00000573852 IPMKQ8NFU5 416 aa19.27■□□□□ 0.68
SCARF1-206ENST00000573852 OR6J1Q8NGC5 347 aa19.27■□□□□ 0.68
SCARF1-206ENST00000573852 EME1Q96AY2 570 aa19.27■□□□□ 0.68
SCARF1-206ENST00000573852 ELMO2Q96JJ3 720 aa19.27■□□□□ 0.68
SCARF1-206ENST00000573852 DDX18Q9NVP1 670 aaKnown RBP19.27■□□□□ 0.68
SCARF1-206ENST00000573852 NCKIPSDQ9NZQ3 722 aa19.27■□□□□ 0.68
SCARF1-206ENST00000573852 MYLKQ15746 1914 aa19.27■□□□□ 0.67
SCARF1-206ENST00000573852 RRN3P2A6NIE6 340 aa19.27■□□□□ 0.67
SCARF1-206ENST00000573852 PDLIM1O00151 329 aa19.27■□□□□ 0.67
SCARF1-206ENST00000573852 STRNO43815 780 aa19.27■□□□□ 0.67
SCARF1-206ENST00000573852 CLCN2P51788 898 aa19.27■□□□□ 0.67
SCARF1-206ENST00000573852 SULT2A1Q06520 285 aa19.27■□□□□ 0.67
SCARF1-206ENST00000573852 PDAP1Q13442 181 aaKnown RBP19.27■□□□□ 0.67
SCARF1-206ENST00000573852 TRIM25Q14258 630 aaKnown RBP19.27■□□□□ 0.67
SCARF1-206ENST00000573852 RPS27LQ71UM5 84 aaKnown RBP19.27■□□□□ 0.67
SCARF1-206ENST00000573852 KLHDC8BQ8IXV7 354 aa19.27■□□□□ 0.67
SCARF1-206ENST00000573852 SPPL2BQ8TCT7 592 aa19.27■□□□□ 0.67
SCARF1-206ENST00000573852 LENG1Q96BZ8 264 aaPredicted RBP19.27■□□□□ 0.67
SCARF1-206ENST00000573852 COQ10BQ9H8M1 238 aa19.27■□□□□ 0.67
SCARF1-206ENST00000573852 UTP6Q9NYH9 597 aaKnown RBP19.27■□□□□ 0.67
SCARF1-206ENST00000573852 DMTF1Q9Y222 760 aa19.27■□□□□ 0.67
SCARF1-206ENST00000573852 RNF11Q9Y3C5 154 aa19.27■□□□□ 0.67
SCARF1-206ENST00000573852 AP4S1Q9Y587 144 aa19.27■□□□□ 0.67
SCARF1-206ENST00000573852 MYBPHLA2RUH7 354 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 AP3B1O00203 1094 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 PENKP01210 267 aaPredicted RBP19.26■□□□□ 0.67
SCARF1-206ENST00000573852 CXCR3P49682 368 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 FAM43BQ6ZT52 329 aaPredicted RBP19.26■□□□□ 0.67
SCARF1-206ENST00000573852 BHLHA9Q7RTU4 235 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 PIWIL4Q7Z3Z4 852 aaKnown RBP19.26■□□□□ 0.67
SCARF1-206ENST00000573852 FAM35AQ86V20 835 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 FAM81AQ8TBF8 368 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 DNAJB3Q8WWF6 145 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 LRTOMTQ8WZ04 291 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 TRPC7Q9HCX4 862 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 CNGB3Q9NQW8 809 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 CNOT11Q9UKZ1 510 aaKnown RBP19.26■□□□□ 0.67
SCARF1-206ENST00000573852 PHF24Q9UPV7 400 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 IPPQ9Y573 584 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 DFFAO00273 331 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 FBP2O00757 339 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 CSPG5O95196 566 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 SMIM10L2AP0DMW4 78 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 SMIM10L2BP0DMW5 78 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 KCNA5P22460 613 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 DUSP28Q4G0W2 176 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 FAM219BQ5XKK7 198 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 CHSY3Q70JA7 882 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 CHERPQ8IWX8 916 aaKnown RBP19.26■□□□□ 0.67
SCARF1-206ENST00000573852 SMG8Q8ND04 991 aaKnown RBP19.26■□□□□ 0.67
SCARF1-206ENST00000573852 PCED1BQ96HM7 432 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 MRPL57Q9BQC6 102 aaKnown RBP19.26■□□□□ 0.67
SCARF1-206ENST00000573852 FICDQ9BVA6 458 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 EPS15L1Q9UBC2 864 aa19.26■□□□□ 0.67
SCARF1-206ENST00000573852 TIMM13Q9Y5L4 95 aaPredicted RBP19.26■□□□□ 0.67
SCARF1-206ENST00000573852 FNDC1Q4ZHG4 1894 aaPredicted RBP19.26■□□□□ 0.67
SCARF1-206ENST00000573852 UNCXA6NJT0 531 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 PTGESO14684 152 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 AURKAO14965 403 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 PSMD3O43242 534 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 DDNO94850 711 aaPredicted RBP19.25■□□□□ 0.67
SCARF1-206ENST00000573852 C8BP07358 591 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 PSMC3P17980 439 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 DNAJB2P25686 324 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 PCSK6P29122 969 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 RALGDSQ12967 914 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 LRP8Q14114 963 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 SNX17Q15036 470 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 RAB41Q5JT25 222 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms