RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CCDC15Q0P6D6 951 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 PDK1Q15118 436 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 STPG1Q5TH74 334 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 KAZNQ674X7 775 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 DPY19L3Q6ZPD9 716 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 ARHGAP36Q6ZRI8 547 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 RYBPQ8N488 228 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-213ENST00000573577 HDDC3Q8N4P3 179 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 NETO2Q8NC67 525 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 TMIEQ8NEW7 156 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 OR2AP1Q8NGE2 309 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 HES6Q96HZ4 224 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 LRIG1Q96JA1 1093 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 HEPHQ9BQS7 1158 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 RTKNQ9BST9 563 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 CINPQ9BW66 212 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-213ENST00000573577 TM6SF2Q9BZW4 377 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 BRD8Q9H0E9 1235 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 NEUROG2Q9H2A3 272 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 TNKS2Q9H2K2 1166 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 CAPN10Q9HC96 672 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 DTLQ9NZJ0 730 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 HECAQ9UBI9 543 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-213ENST00000573577 SEPT3Q9UH03 358 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 IL36AQ9UHA7 158 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 SARDHQ9UL12 918 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 SLC6A14Q9UN76 642 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.74□□□□□ -0.21
RPAIN-213ENST00000573577 HEY1Q9Y5J3 304 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 ACTL7AQ9Y615 435 aa13.74□□□□□ -0.21
RPAIN-213ENST00000573577 DNAH14Q0VDD8 3507 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 GOLGA6L9A6NEM1 432 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 CST8O60676 142 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 ZNF821O75541 412 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-213ENST00000573577 NEBLO76041 1014 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 POP4O95707 220 aaKnown RBP13.73□□□□□ -0.21
RPAIN-213ENST00000573577 KRT10P13645 584 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 CCNCP24863 283 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 MSNP26038 577 aaKnown RBP13.73□□□□□ -0.21
RPAIN-213ENST00000573577 DRD3P35462 400 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 CCNHP51946 323 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-213ENST00000573577 METAP1P53582 386 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 DYNLT1P63172 113 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 GBE1Q04446 702 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 ZNF235Q14590 738 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 LBRQ14739 615 aaKnown RBP13.73□□□□□ -0.21
RPAIN-213ENST00000573577 GRM3Q14832 879 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 RPS6KA1Q15418 735 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 CCDC181Q5TID7 509 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 TP53INP2Q8IXH6 220 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 CCNYQ8ND76 341 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 PIP4K2CQ8TBX8 421 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 SNX19Q92543 992 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 ALG3Q92685 438 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 P3H4Q92791 437 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 FATE1Q969F0 183 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 FAM131CQ96AQ9 280 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 HDAC11Q96DB2 347 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 PPP1R16AQ96I34 528 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 TSGA13Q96PP4 275 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 MIR1-1HGQ9H1L0 117 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 DYRK4Q9NR20 520 aa13.73□□□□□ -0.21
RPAIN-213ENST00000573577 PACSIN2Q9UNF0 486 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-213ENST00000573577 CEP192Q8TEP8 1941 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 FAM47DPA6NHR8 397 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 LRRC72A6NJI9 287 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 DDX3YO15523 660 aaKnown RBP13.72□□□□□ -0.21
RPAIN-213ENST00000573577 TJP3O95049 919 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 FSBPO95073 299 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 CTSLP07711 333 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 ENGP17813 658 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 MAPK8P45983 427 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 ADPRHP54922 357 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 NSUN2Q08J23 767 aaKnown RBP eCLIP13.72□□□□□ -0.21
RPAIN-213ENST00000573577 HNRNPDQ14103 355 aaKnown RBP13.72□□□□□ -0.21
RPAIN-213ENST00000573577 CYTH1Q15438 398 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 MYLK3Q32MK0 819 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 POM121L1PQ3SYA9 428 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 SEL1L2Q5TEA6 688 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 MEI1Q5TIA1 1274 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 MARC1Q5VT66 337 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 KIAA0895LQ68EN5 471 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 NCEH1Q6PIU2 408 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 BBS12Q6ZW61 710 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 ZCCHC9Q8N567 271 aaKnown RBP13.72□□□□□ -0.21
RPAIN-213ENST00000573577 CHST14Q8NCH0 376 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 OR2T34Q8NGX1 318 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 GRIN3AQ8TCU5 1115 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 BIRC7Q96CA5 298 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 PSKH2Q96QS6 385 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 OSBPL1AQ9BXW6 950 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 OSBPL8Q9BZF1 889 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 ZDHHC6Q9H6R6 413 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 TMEM9BQ9NQ34 198 aa13.72□□□□□ -0.21
RPAIN-213ENST00000573577 EIF2B4Q9UI10 523 aaKnown RBP13.72□□□□□ -0.21
RPAIN-213ENST00000573577 A0A1B0GTW7 788 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 APOC4-APOC2K7ER74 178 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 PLK4O00444 970 aa13.71□□□□□ -0.21
RPAIN-213ENST00000573577 KPNA3O00505 521 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-213ENST00000573577 KRIT1O00522 736 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms