RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CAMK2BQ13554 666 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 GRM3Q14832 879 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ACAP1Q15027 740 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 ERMARDQ5T6L9 678 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 CYP4V2Q6ZWL3 525 aaPredicted RBP17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 TMPRSS12Q86WS5 348 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 PROSER1Q86XN7 944 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 CACTIN-AS1Q8N1I8 211 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 HMCESQ96FZ2 354 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 PDFQ9HBH1 243 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 AP4E1Q9UPM8 1137 aa17.34■□□□□ 0.37
MAP1LC3B-208ENST00000570189 SRRM3A6NNA2 597 aaPredicted RBP17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SPINT1O43278 529 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 BUB1O43683 1085 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 RFPL3O75679 317 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 IGSF6O95976 241 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 FTLP02792 175 aaPredicted RBP17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PSMA2P25787 234 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ABL2P42684 1182 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 KLHL30Q0D2K2 578 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ZNF211Q13398 564 aaPredicted RBP17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 FGL2Q14314 439 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 AFMIDQ63HM1 303 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SLC22A18ASQ8N1D0 253 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 EID2Q8N6I1 236 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 OR13H1Q8NG92 308 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 BMFQ96LC9 184 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 KLF6Q99612 283 aaPredicted RBP17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 KLC2Q9H0B6 622 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CA5BQ9Y2D0 317 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 BZW2Q9Y6E2 419 aaKnown RBP17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ACACAQ13085 2346 aa17.33■□□□□ 0.36
MAP1LC3B-208ENST00000570189 FAM208BQ5VWN6 2430 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TSPAN11A1L157 253 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 KRIT1O00522 736 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TOR1BO14657 336 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 RIOK3O14730 519 aaKnown RBP17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PRAMEF11O60813 436 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 RNF8O76064 485 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SERPINC1P01008 464 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 UGT2B4P06133 528 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ACP1P24666 158 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PCK1P35558 622 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PROX2Q3B8N5 592 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 HGSNATQ68CP4 663 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 GDPD4Q6W3E5 623 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SLC25A45Q8N413 288 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 OR4C6Q8NH72 309 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 RFFLQ8WZ73 363 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 KLK6Q92876 244 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PEBP4Q96S96 227 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SNRNP25Q9BV90 132 aaKnown RBP17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 MRPL47Q9HD33 250 aaKnown RBP17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 FZD3Q9NPG1 666 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 LHX3Q9UBR4 397 aa17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CNOT8Q9UFF9 292 aaKnown RBP17.32■□□□□ 0.36
MAP1LC3B-208ENST00000570189 DSPP15924 2871 aaKnown RBP17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SPTY2D1-AS1A0A0U1RR47 76 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TMCO5BA8MYB1 307 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TAF4O00268 1085 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 EEF2KO00418 725 aaKnown RBP17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ATMINO43313 823 aaPredicted RBP17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 LRCH4O75427 683 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CKMT2P17540 419 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 DGKAP23743 735 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 GKP32189 559 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 RABIFP47224 123 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CSNK1DP48730 415 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 RHOAP61586 193 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 TPM4P67936 248 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ATXN7L2Q5T6C5 722 aaPredicted RBP17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 RFX8Q6ZV50 586 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 DNAAF5Q86Y56 855 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 RYBPQ8N488 228 aaPredicted RBP17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 OR6K2Q8NGY2 324 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 KLHL32Q96NJ5 620 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CBX8Q9HC52 389 aa17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 UBA2Q9UBT2 640 aaPredicted RBP17.31■□□□□ 0.36
MAP1LC3B-208ENST00000570189 APC2O95996 2303 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SYCE3A1L190 88 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 POM121BA6NF01 834 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 ARHGAP42A6NI28 874 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 RAD51BO15315 384 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PRPSAP2O60256 369 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PIAS2O75928 621 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PAK4O96013 591 aaPredicted RBP17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 GIMD1P0DJR0 217 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PTMSP20962 102 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 MIPP30301 263 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PFN3P60673 137 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 FANCCQ00597 558 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 DNAJC3Q13217 504 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 SGCGQ13326 291 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CYTH1Q15438 398 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CA9Q16790 459 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 DHRS13Q6UX07 377 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 Q6ZSR6 202 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 LZTR1Q8N653 840 aa17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 PDCD7Q8N8D1 485 aaKnown RBP17.3■□□□□ 0.36
MAP1LC3B-208ENST00000570189 CENPTQ96BT3 561 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms