RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 ANO4Q32M45 955 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 RABGAP1LQ5R372 815 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 MFSD14CQ5VZR4 134 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 PM20D1Q6GTS8 502 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 PKN3Q6P5Z2 889 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 FAM171BQ6P995 826 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 TMEM154Q6P9G4 183 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 SCD5Q86SK9 330 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 KBTBD2Q8IY47 623 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 RYBPQ8N488 228 aaPredicted RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 PPHLN1Q8NEY8 458 aaKnown RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 SH3TC2Q8TF17 1288 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 EXT2Q93063 718 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 ZNF333Q96JL9 665 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 YIPF3Q9GZM5 350 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 ILKAPQ9H0C8 392 aaPredicted RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 CSNK1G1Q9HCP0 422 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 TCF7L2Q9NQB0 619 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 ABCC13Q9NSE7 274 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 GTSE1Q9NYZ3 720 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 DLGAP2Q9P1A6 1054 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 IPO11Q9UI26 975 aaKnown RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 ZDHHC2Q9UIJ5 367 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 AAR2Q9Y312 384 aaKnown RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 HS3ST4Q9Y661 456 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 CDY1Q9Y6F8 540 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 A0A0U1RQF3 1178 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 MAGEB16A2A368 324 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 OR51F1A6NGY5 319 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 MANSC4A6NHS7 340 aaPredicted RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 MAGEC1O60732 1142 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 DDHD2O94830 711 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 ANPEPP15144 967 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 RPL17P18621 184 aaKnown RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 TCN1P20061 433 aaPredicted RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 CD86P42081 329 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 PRKCZQ05513 592 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 PCID2Q5JVF3 399 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 CNSTQ6PJW8 725 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 CD300LGQ6UXG3 332 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 TMC7Q7Z402 723 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 MFSD6LQ8IWD5 586 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 GIPC2Q8TF65 315 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 SOCS4Q8WXH5 440 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 USP13Q92995 863 aaPredicted RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 PHF21BQ96EK2 531 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 PGAP3Q96FM1 320 aaPredicted RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 VAT1Q99536 393 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 CATSPERBQ9H7T0 1116 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 RRN3Q9NYV6 651 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 STX18Q9P2W9 335 aaKnown RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 DNAJB4Q9UDY4 337 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 FNDC3AQ9Y2H6 1198 aaKnown RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 ACOT9Q9Y305 439 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 PCDHB12Q9Y5F1 795 aa8.86□□□□□ -0.99
LINC00558-201ENST00000569422 ZNF638Q14966 1978 aaKnown RBP8.86□□□□□ -0.99
LINC00558-201ENST00000569422 ERI2A8K979 691 aaKnown RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 NT5C1B-RDH14C9J2C7 533 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 ZNF195O14628 629 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 ZCCHC18P0CG32 403 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 SLC35E2BP0CK96 405 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 COL6A1P12109 1028 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 STMN1P16949 149 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 AOC1P19801 751 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 CPOXP36551 454 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 NUDT2P50583 147 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 TAS2R39P59534 338 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 USP46P62068 366 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 AP2B1P63010 937 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 TBL3Q12788 808 aaKnown RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 CBLBQ13191 982 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 PTPRCAPQ14761 206 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 TOMM20Q15388 145 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 RBM20Q5T481 1227 aaKnown RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 CAPRIN2Q6IMN6 1127 aaKnown RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 IZUMO2Q6UXV1 221 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 LINC00523Q86TU6 105 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 NELL1Q92832 810 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 MMADHCQ9H3L0 296 aaPredicted RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 PCDH12Q9NPG4 1184 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 NDE1Q9NXR1 346 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 SSX2IPQ9Y2D8 614 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 MTF2Q9Y483 593 aaPredicted RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 ZSWIM8A7E2V4 1837 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 ANXA9O76027 345 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 LUC7L3O95232 432 aaKnown RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 HAPLN1P10915 354 aaPredicted RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 COX4I1P13073 169 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 ENO3P13929 434 aaPredicted RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 TFEBP19484 476 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 CCNCP24863 283 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 HARS2P49590 506 aaKnown RBP8.85□□□□□ -0.99
LINC00558-201ENST00000569422 CCNG1P51959 295 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 RAP1GDS1P52306 607 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 WNT3AP56704 352 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 SLC10A7Q0GE19 358 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 ASPHQ12797 758 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 DLG1Q12959 904 aa8.85□□□□□ -0.99
LINC00558-201ENST00000569422 ALFQ53S48 1182 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms