RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 PPP2CAP67775 309 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 SLC14A1Q13336 389 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 CA9Q16790 459 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 HADHQ16836 314 aaKnown RBP14.71□□□□□ -0.05
COMMD4-225ENST00000569245 PARP15Q460N3 678 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 AGBL4Q5VU57 503 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 ERN2Q76MJ5 926 aaKnown RBP14.71□□□□□ -0.05
COMMD4-225ENST00000569245 POLNQ7Z5Q5 900 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 RHOT1Q8IXI2 618 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 UBL4BQ8N7F7 174 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 OR6K2Q8NGY2 324 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 ISG20Q96AZ6 181 aaKnown RBP14.71□□□□□ -0.05
COMMD4-225ENST00000569245 ARRDC3Q96B67 414 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 HMCESQ96FZ2 354 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 PEBP4Q96S96 227 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 ORAI3Q9BRQ5 295 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 SNRNP25Q9BV90 132 aaKnown RBP14.71□□□□□ -0.05
COMMD4-225ENST00000569245 NOL6Q9H6R4 1146 aaKnown RBP14.71□□□□□ -0.05
COMMD4-225ENST00000569245 IL21RQ9HBE5 538 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 SNX12Q9UMY4 172 aa14.71□□□□□ -0.05
COMMD4-225ENST00000569245 PACSIN2Q9UNF0 486 aaPredicted RBP14.71□□□□□ -0.05
COMMD4-225ENST00000569245 NUMA1Q14980 2115 aa14.71□□□□□ -0.06
COMMD4-225ENST00000569245 CEP192Q8TEP8 1941 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 WASH4PA8MWX3 477 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 KRIT1O00522 736 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 CES2O00748 559 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 KCNK3O14649 394 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 CD160O95971 181 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 TCP1P17987 556 aaKnown RBP14.7□□□□□ -0.06
COMMD4-225ENST00000569245 SSR1P43307 286 aaKnown RBP14.7□□□□□ -0.06
COMMD4-225ENST00000569245 SNRPD1P62314 119 aaKnown RBP14.7□□□□□ -0.06
COMMD4-225ENST00000569245 BNC1Q01954 994 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 SLC25A11Q02978 314 aaKnown RBP14.7□□□□□ -0.06
COMMD4-225ENST00000569245 TUBB2AQ13885 445 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 SLC45A4Q5BKX6 768 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 PIP5KL1Q5T9C9 394 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 FBXL19Q6PCT2 694 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 RFX8Q6ZV50 586 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 PSTKQ8IV42 348 aaKnown RBP14.7□□□□□ -0.06
COMMD4-225ENST00000569245 UMODL1-AS1Q8N2C9 162 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 SETD7Q8WTS6 366 aaKnown RBP14.7□□□□□ -0.06
COMMD4-225ENST00000569245 KRT35Q92764 455 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 CELF6Q96J87 481 aaKnown RBP14.7□□□□□ -0.06
COMMD4-225ENST00000569245 KCTD15Q96SI1 283 aaPredicted RBP14.7□□□□□ -0.06
COMMD4-225ENST00000569245 TUBB2BQ9BVA1 445 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 HDAC8Q9BY41 377 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 ZWILCHQ9H900 591 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 EBF2Q9HAK2 575 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 PREBQ9HCU5 417 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 TM7SF3Q9NS93 570 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.7□□□□□ -0.06
COMMD4-225ENST00000569245 PCDHB9Q9Y5E1 797 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 SAR1BQ9Y6B6 198 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 WASF2Q9Y6W5 498 aa14.7□□□□□ -0.06
COMMD4-225ENST00000569245 CNOT1A5YKK6 2376 aaKnown RBP14.69□□□□□ -0.06
COMMD4-225ENST00000569245 A0A1W2PQU0 124 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 UPK3BL1B0FP48 263 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 UPK3BL2E5RIL1 263 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 RNF103O00237 685 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 VILLO15195 856 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 SH3BP5O60239 455 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 RNGTTO60942 597 aaKnown RBP14.69□□□□□ -0.06
COMMD4-225ENST00000569245 TMCC1O94876 653 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 PCDH8O95206 1070 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 POP4O95707 220 aaKnown RBP14.69□□□□□ -0.06
COMMD4-225ENST00000569245 GSRP00390 522 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 KRT7P08729 469 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 CD59P13987 128 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 CD38P28907 300 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 GKP32189 559 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 NDST2P52849 883 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 SERINC3Q13530 473 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 SMTNL2Q2TAL5 461 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 MYLK3Q32MK0 819 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 SETMARQ53H47 684 aaPredicted RBP14.69□□□□□ -0.06
COMMD4-225ENST00000569245 BOLA3Q53S33 107 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 KCNT1Q5JUK3 1230 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 ATXN7L2Q5T6C5 722 aaPredicted RBP14.69□□□□□ -0.06
COMMD4-225ENST00000569245 PIP4P1Q86T03 277 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 TRIM69Q86WT6 500 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 KATNAL2Q8IYT4 538 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 NETO2Q8NC67 525 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 OR2AP1Q8NGE2 309 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 CASKIN2Q8WXE0 1202 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 HSPH1Q92598 858 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 FAM131CQ96AQ9 280 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 PBKQ96KB5 322 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 CAMK1GQ96NX5 476 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 OSBPL9Q96SU4 736 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 KLC2Q9H0B6 622 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 CARD9Q9H257 536 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 FNDC3AQ9Y2H6 1198 aaKnown RBP14.69□□□□□ -0.06
COMMD4-225ENST00000569245 PI4KAP42356 2102 aa14.69□□□□□ -0.06
COMMD4-225ENST00000569245 SPAARA0A1B0GVQ0 90 aa14.68□□□□□ -0.06
COMMD4-225ENST00000569245 ARHGAP42A6NI28 874 aa14.68□□□□□ -0.06
COMMD4-225ENST00000569245 H3BRJ5 948 aa14.68□□□□□ -0.06
COMMD4-225ENST00000569245 WNT9AO14904 365 aa14.68□□□□□ -0.06
COMMD4-225ENST00000569245 LATO43561 262 aa14.68□□□□□ -0.06
COMMD4-225ENST00000569245 GJB3O75712 270 aa14.68□□□□□ -0.06
COMMD4-225ENST00000569245 TCF4P15884 667 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms