RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ATPAF2Q8N5M1 289 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 LRRC57Q8N9N7 239 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 C12orf50Q8NA57 414 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-213ENST00000568158 C1orf216Q8TAB5 229 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 KLK6Q92876 244 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 LRIG1Q96JA1 1093 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 CALR3Q96L12 384 aaKnown RBP13.18□□□□□ -0.3
CNOT1-213ENST00000568158 ZNF599Q96NL3 588 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 ORAI3Q9BRQ5 295 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 CINPQ9BW66 212 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-213ENST00000568158 HDAC8Q9BY41 377 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 PCED1AQ9H1Q7 454 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 DTLQ9NZJ0 730 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-213ENST00000568158 PCDHA3Q9Y5H8 950 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 HEY1Q9Y5J3 304 aa13.18□□□□□ -0.3
CNOT1-213ENST00000568158 ZNF487B1APH4 448 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 C10orf142B7Z368 130 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 APOL1O14791 398 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 WNT9AO14904 365 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 SLC7A4O43246 635 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 RNGTTO60942 597 aaKnown RBP13.17□□□□□ -0.3
CNOT1-213ENST00000568158 PIGNO95427 931 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 CFIP05156 583 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 TIMP2P16035 220 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 CCNCP24863 283 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 ITGB7P26010 798 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 MAT2AP31153 395 aaKnown RBP13.17□□□□□ -0.3
CNOT1-213ENST00000568158 CSNK1DP48730 415 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 PEX5P50542 639 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 SCNN1BP51168 640 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 CCR5P51681 352 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 NEK3P51956 506 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 MAXP61244 160 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 ADCY2Q08462 1091 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 NSUN2Q08J23 767 aaKnown RBP eCLIP13.17□□□□□ -0.3
CNOT1-213ENST00000568158 TAZQ16635 292 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 IFI16Q16666 785 aaKnown RBP13.17□□□□□ -0.3
CNOT1-213ENST00000568158 AASDHQ4L235 1098 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-213ENST00000568158 TMCO4Q5TGY1 634 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 MARC1Q5VT66 337 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 SLC9A4Q6AI14 798 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 SLC23A3Q6PIS1 610 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 TTC7BQ86TV6 843 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 NT5DC3Q86UY8 548 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 VSIG1Q86XK7 387 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 CAMK1DQ8IU85 385 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 LRRC49Q8IUZ0 686 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 KATNAL2Q8IYT4 538 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 ZCCHC9Q8N567 271 aaKnown RBP13.17□□□□□ -0.3
CNOT1-213ENST00000568158 CCNYQ8ND76 341 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 CCDC112Q8NEF3 446 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-213ENST00000568158 PPP1R16AQ96I34 528 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 CPEB1Q9BZB8 566 aaKnown RBP13.17□□□□□ -0.3
CNOT1-213ENST00000568158 KDM4CQ9H3R0 1056 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 SUV39H2Q9H5I1 410 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 SAE1Q9UBE0 346 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-213ENST00000568158 SEPT3Q9UH03 358 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 AMFRQ9UKV5 643 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 GUCA1BQ9UMX6 200 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 SLC6A14Q9UN76 642 aa13.17□□□□□ -0.3
CNOT1-213ENST00000568158 A0A1B0GTW7 788 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-213ENST00000568158 A0A1W2PPC4 97 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 MATN3O15232 486 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 BCAT2O15382 392 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-213ENST00000568158 CST8O60676 142 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 PCDH8O95206 1070 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 SERPINF2P08697 491 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 ADRB3P13945 408 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 GNSP15586 552 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 CD27P26842 260 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 DPP6P42658 865 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 ABL2P42684 1182 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 CSNK1EP49674 416 aaKnown RBP13.16□□□□□ -0.3
CNOT1-213ENST00000568158 RENBPP51606 427 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 CCDC15Q0P6D6 951 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 LRRC73Q5JTD7 316 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 AADACL2Q6P093 401 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 PRPF39Q86UA1 669 aaKnown RBP13.16□□□□□ -0.3
CNOT1-213ENST00000568158 CCDC50Q8IVM0 306 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 TXLNBQ8N3L3 684 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 TEX26Q8N6G2 289 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 EXD1Q8NHP7 514 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 CEP76Q8TAP6 659 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 NSMCE1Q8WV22 266 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 TSGA13Q96PP4 275 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 PSKH2Q96QS6 385 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 LGMNQ99538 433 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 HEMGNQ9BXL5 484 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 NUSAP1Q9BXS6 441 aaKnown RBP13.16□□□□□ -0.3
CNOT1-213ENST00000568158 OSBPL1AQ9BXW6 950 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 NT5MQ9NPB1 228 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 RBM22Q9NW64 420 aaKnown RBP eCLIP13.16□□□□□ -0.3
CNOT1-213ENST00000568158 PACSIN2Q9UNF0 486 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-213ENST00000568158 ZFR2Q9UPR6 939 aaKnown RBP13.16□□□□□ -0.3
CNOT1-213ENST00000568158 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
CNOT1-213ENST00000568158 FADS3Q9Y5Q0 445 aa13.16□□□□□ -0.3
CNOT1-213ENST00000568158 PIEZO1Q92508 2521 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms