RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 RTL3Q8N8U3 475 aaKnown RBP18.89■□□□□ 0.61
LINC01238-205ENST00000567549 WDR48Q8TAF3 677 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 GPT2Q8TD30 523 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 CXorf40AQ8TE69 158 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 TBATAQ96M53 351 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 UBL7Q96S82 380 aaPredicted RBP18.89■□□□□ 0.61
LINC01238-205ENST00000567549 EIF3CQ99613 913 aaKnown RBP18.89■□□□□ 0.61
LINC01238-205ENST00000567549 IL12RB2Q99665 862 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 NCAPGQ9BPX3 1015 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 GPR27Q9NS67 375 aa18.89■□□□□ 0.61
LINC01238-205ENST00000567549 LGALS16A8MUM7 142 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 TPP1O14773 563 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 ACVRL1P37023 503 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 BLKP51451 505 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 ZNF143P52747 638 aaPredicted RBP18.88■□□□□ 0.61
LINC01238-205ENST00000567549 COPB1P53618 953 aaKnown RBP18.88■□□□□ 0.61
LINC01238-205ENST00000567549 HDAC4P56524 1084 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 RHOAP61586 193 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 UBXN1Q04323 297 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 PDE1CQ14123 709 aaPredicted RBP18.88■□□□□ 0.61
LINC01238-205ENST00000567549 STX1AQ16623 288 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 CLEC16AQ2KHT3 1053 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 CFAP58Q5T655 872 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 DCUN1D2Q6PH85 259 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 GDPD4Q6W3E5 623 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 KDM7AQ6ZMT4 941 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 TMC6Q7Z403 805 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 TTC7BQ86TV6 843 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 HCAR2Q8TDS4 363 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 APOLD1Q96LR9 279 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 TTYH3Q9C0H2 523 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 NAT10Q9H0A0 1025 aaKnown RBP18.88■□□□□ 0.61
LINC01238-205ENST00000567549 FANCLQ9NW38 375 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 SPASTQ9UBP0 616 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 DKK3Q9UBP4 350 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 SALL4Q9UJQ4 1053 aa18.88■□□□□ 0.61
LINC01238-205ENST00000567549 IGLON5A6NGN9 336 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 TMEM110-MUSTN1A8MSY1 372 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 K7ESM1 405 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 AQP9O43315 295 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 TM7SF2O76062 418 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 UGT2B4P06133 528 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 FERP16591 822 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 JUNDP17535 347 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 CHRNB2P17787 502 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 RFC1P35251 1148 aaPredicted RBP18.87■□□□□ 0.61
LINC01238-205ENST00000567549 SCYL2Q6P3W7 929 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 SLC22A18ASQ8N1D0 253 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 ZNF548Q8NEK5 533 aaPredicted RBP18.87■□□□□ 0.61
LINC01238-205ENST00000567549 ATL2Q8NHH9 583 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 JOSD2Q8TAC2 188 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 VCPIP1Q96JH7 1222 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 BMFQ96LC9 184 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 ZNF578Q96N58 590 aaPredicted RBP18.87■□□□□ 0.61
LINC01238-205ENST00000567549 KLHL32Q96NJ5 620 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 CNPY3Q9BT09 278 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 SLC13A1Q9BZW2 595 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 LMBRD1Q9NUN5 540 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 UCKL1Q9NWZ5 548 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 LIMA1Q9UHB6 759 aaKnown RBP18.87■□□□□ 0.61
LINC01238-205ENST00000567549 SIK3Q9Y2K2 1263 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 MFHAS1Q9Y4C4 1052 aa18.87■□□□□ 0.61
LINC01238-205ENST00000567549 FAM170AA1A519 330 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 POM121BA6NF01 834 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 OPA1O60313 960 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 TMCC1O94876 653 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 UCNP55089 124 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 FZD2Q14332 565 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 TBC1D25Q3MII6 688 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 BROXQ5VW32 411 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 WDR59Q6PJI9 974 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 RBM43Q6ZSC3 357 aaKnown RBP18.86■□□□□ 0.61
LINC01238-205ENST00000567549 CCDC185Q8N715 623 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 MAPK15Q8TD08 544 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 SCG3Q8WXD2 468 aaKnown RBP18.86■□□□□ 0.61
LINC01238-205ENST00000567549 NAT6Q93015 286 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 ERGIC2Q96RQ1 377 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 AGPAT1Q99943 283 aa18.86■□□□□ 0.61
LINC01238-205ENST00000567549 CPEB1Q9BZB8 566 aaKnown RBP18.86■□□□□ 0.61
LINC01238-205ENST00000567549 TK2O00142 265 aa18.85■□□□□ 0.61
LINC01238-205ENST00000567549 CREB3O43889 395 aa18.85■□□□□ 0.61
LINC01238-205ENST00000567549 BRINP1O60477 761 aa18.85■□□□□ 0.61
LINC01238-205ENST00000567549 HTR1BP28222 390 aa18.85■□□□□ 0.61
LINC01238-205ENST00000567549 PCBP4P57723 403 aaKnown RBP18.85■□□□□ 0.61
LINC01238-205ENST00000567549 NR0B2Q15466 257 aa18.85■□□□□ 0.61
LINC01238-205ENST00000567549 ERAP2Q6P179 960 aa18.85■□□□□ 0.61
LINC01238-205ENST00000567549 DNAAF5Q86Y56 855 aa18.85■□□□□ 0.61
LINC01238-205ENST00000567549 SDR16C5Q8N3Y7 309 aa18.85■□□□□ 0.61
LINC01238-205ENST00000567549 LSM14AQ8ND56 463 aaKnown RBP18.85■□□□□ 0.61
LINC01238-205ENST00000567549 ZNF248Q8NDW4 579 aa18.85■□□□□ 0.61
LINC01238-205ENST00000567549 OR6K2Q8NGY2 324 aa18.85■□□□□ 0.61
LINC01238-205ENST00000567549 APOBEC3BQ9UH17 382 aaKnown RBP18.85■□□□□ 0.61
LINC01238-205ENST00000567549 MYO6Q9UM54 1294 aa18.85■□□□□ 0.61
LINC01238-205ENST00000567549 LRRC10BA6NIK2 292 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 WASH4PA8MWX3 477 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 FAM72CH0Y354 149 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 AREL1O15033 823 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 CD160O95971 181 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 ANXA6P08133 673 aa18.84■□□□□ 0.61
LINC01238-205ENST00000567549 ABL2P42684 1182 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms