RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 GRAMD2AQ8IUY3 354 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 SCN4BQ8IWT1 228 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 DHX40Q8IX18 779 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 DDIASQ8IXT1 998 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 EIF1ADQ8N9N8 165 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 AGBL5Q8NDL9 886 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 MYCBPAPQ8TBZ2 947 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 SLC26A7Q8TE54 656 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 THAP4Q8WY91 577 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 ADIPOR1Q96A54 375 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 DTNBP1Q96EV8 351 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 PPP1R36Q96LQ0 422 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 C19orf43Q9BQ61 176 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 MGME1Q9BQP7 344 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 GORASP1Q9BQQ3 440 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 TUBGCP2Q9BSJ2 902 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 NAA11Q9BSU3 229 aaPredicted RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 ZNF416Q9BWM5 594 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 GLIS2Q9BZE0 524 aaPredicted RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 GPR61Q9BZJ8 451 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 RAB17Q9H0T7 212 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 PCDHAC1Q9H158 963 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 GPAMQ9HCL2 828 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 SERHLQ9NQF3 203 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 SDHAF3Q9NRP4 125 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 RAB20Q9NX57 234 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 TAS2R10Q9NYW0 307 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 EHD3Q9NZN3 535 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 ARHGAP20Q9P2F6 1191 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 WARS2Q9UGM6 360 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 NENFQ9UMX5 172 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 COPG1Q9Y678 874 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 GOLGA8QA0A0J9YX86 632 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 TEX46H3BTG2 121 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 J3QW42 95 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 DNM1LO00429 736 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 TRDMT1O14717 391 aaKnown RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 FPGTO14772 594 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 ZSCAN9O15535 394 aaPredicted RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 EFSO43281 561 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 DFNA5O60443 496 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 RECQL4O94761 1208 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 SPDEFO95238 335 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 POP4O95707 220 aaKnown RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 CD3EP07766 207 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 POU2F1P14859 743 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 PTNP21246 168 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 KLRK1P26718 216 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 PBX3P40426 434 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 CCR4P51679 360 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 ARHGDIBP52566 201 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 EIF3EP60228 445 aaKnown RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 SKP1P63208 163 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 KRT85P78386 507 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 MGAT5Q09328 741 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 HNRNPDQ14103 355 aaKnown RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 UGT3A2Q3SY77 523 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 C10orf120Q5SQS8 335 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 C12orf60Q5U649 245 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 CCDC121Q6ZUS5 278 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 H1FNTQ75WM6 255 aaPredicted RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 PATL1Q86TB9 770 aaKnown RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 CCDC13Q8IYE1 715 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 CFAP206Q8IYR0 622 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 SLC15A4Q8N697 577 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 POU5F2Q8N7G0 328 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 ARRDC4Q8NCT1 418 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 PCDH19Q8TAB3 1148 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 FIBINQ8TAL6 211 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 POC1BQ8TC44 478 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 LRRC20Q8TCA0 184 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 CREB3L4Q8TEY5 395 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 DCAF4Q8WV16 495 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 CPT1BQ92523 772 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 PHF21BQ96EK2 531 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 BSCL2Q96G97 398 aaPredicted RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 MSANTD3Q96H12 275 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 ZBED3Q96IU2 234 aaPredicted RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 DMRTA2Q96SC8 542 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 STRA6Q9BX79 667 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 PABPC3Q9H361 631 aaKnown RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 AKIRIN1Q9H9L7 192 aaPredicted RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 EPB41L5Q9HCM4 733 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 IL20Q9NYY1 176 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 OGFRQ9NZT2 677 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 STX18Q9P2W9 335 aaKnown RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 DDX25Q9UHL0 483 aaKnown RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 PLA2G4CQ9UP65 541 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 RNF24Q9Y225 148 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 DERAQ9Y315 318 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 PCDHB4Q9Y5E5 795 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 MAPK8IP3Q9UPT6 1336 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.12□□□□□ -1.91
CHD9-216ENST00000565803 AGAP14A8MT82 685 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 GOLGA8KD6RF30 607 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 WWP2O00308 870 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 PSMD14O00487 310 aa3.12□□□□□ -1.91
CHD9-216ENST00000565803 EIF3DO15371 548 aaKnown RBP eCLIP3.12□□□□□ -1.919e-7■□□□□ 9.6
CHD9-216ENST00000565803 HDAC3O15379 428 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms