RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 FAM71DQ8N9W8 422 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 MAIP1Q8WWC4 291 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 PRCCQ92733 491 aaPredicted RBP12.62□□□□□ -0.39
KARS-204ENST00000564578 CAPZA3Q96KX2 299 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 NUDCD1Q96RS6 583 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 SEMA3CQ99985 751 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 POLR1EQ9GZS1 481 aaKnown RBP12.62□□□□□ -0.39
KARS-204ENST00000564578 ZDHHC6Q9H6R6 413 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 ITM2CQ9NQX7 267 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 NUMA1Q14980 2115 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 TRAFD1O14545 582 aaPredicted RBP12.62□□□□□ -0.39
KARS-204ENST00000564578 PIGNO95427 931 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 PRNPP04156 253 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 SP9P0CG40 484 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 KCNJ1P48048 391 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 PSMD8P48556 350 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 TPMTP51580 245 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 ZBTB16Q05516 673 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 CYP1B1Q16678 543 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 TTC27Q6P3X3 843 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 DSG4Q86SJ6 1040 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 PRPF39Q86UA1 669 aaKnown RBP12.62□□□□□ -0.39
KARS-204ENST00000564578 CAMK1DQ8IU85 385 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 PGBD3Q8N328 593 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 BBS5Q8N3I7 341 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 RLN3Q8WXF3 142 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 ZNF592Q92610 1267 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 RTP4Q96DX8 246 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 LRIG1Q96JA1 1093 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 NAP1L3Q99457 506 aaPredicted RBP12.62□□□□□ -0.39
KARS-204ENST00000564578 VAT1Q99536 393 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 USP36Q9P275 1121 aaKnown RBP12.62□□□□□ -0.39
KARS-204ENST00000564578 TTLL3Q9Y4R7 772 aa12.62□□□□□ -0.39
KARS-204ENST00000564578 C5orf60A6NFR6 353 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 PLK4O00444 970 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 AXIN1O15169 862 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 RNASEH1O60930 286 aaKnown RBP12.61□□□□□ -0.39
KARS-204ENST00000564578 UGT2B4P06133 528 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 ITGAVP06756 1048 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 C5AR1P21730 350 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 STIP1P31948 543 aaKnown RBP12.61□□□□□ -0.39
KARS-204ENST00000564578 FNTBP49356 437 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 AP1S1P61966 158 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 ZNF528Q3MIS6 628 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 KIAA1324Q6UXG2 1013 aaKnown RBP12.61□□□□□ -0.39
KARS-204ENST00000564578 PID1Q7Z2X4 250 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 GLIS1Q8NBF1 620 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 CCDC110Q8TBZ0 833 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 FAM131CQ96AQ9 280 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 ARRDC3Q96B67 414 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 TADA1Q96BN2 335 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 IMP4Q96G21 291 aaKnown RBP12.61□□□□□ -0.39
KARS-204ENST00000564578 PABPC3Q9H361 631 aaKnown RBP12.61□□□□□ -0.39
KARS-204ENST00000564578 ZNF148Q9UQR1 794 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 DRG1Q9Y295 367 aaKnown RBP12.61□□□□□ -0.39
KARS-204ENST00000564578 PCDHGC4Q9Y5F7 938 aa12.61□□□□□ -0.39
KARS-204ENST00000564578 GON4LQ3T8J9 2241 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 SDK1Q7Z5N4 2213 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 KPNA3O00505 521 aaPredicted RBP12.6□□□□□ -0.39
KARS-204ENST00000564578 ADH1BP00325 375 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 IGLV3-19P01714 112 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 DNTTP04053 509 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 TUBB4AP04350 444 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 ITKQ08881 620 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 MAP7D1Q3KQU3 841 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 ZNF805Q5CZA5 627 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 RALGPS1Q5JS13 557 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 ANKRD20A2Q5SQ80 823 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 ANKRD20A1Q5TYW2 823 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 ANKRD20A3Q5VUR7 823 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 GDPD4Q6W3E5 623 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 PRUNE1Q86TP1 453 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 ZSWIM9Q86XI8 627 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 FAM160A2Q8N612 972 aaPredicted RBP12.6□□□□□ -0.39
KARS-204ENST00000564578 C12orf50Q8NA57 414 aaPredicted RBP12.6□□□□□ -0.39
KARS-204ENST00000564578 ZBTB44Q8NCP5 570 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 SPATA22Q8NHS9 363 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 ECHDC3Q96DC8 303 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 KLHL32Q96NJ5 620 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 TUBGCP5Q96RT8 1024 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 GORASP1Q9BQQ3 440 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 SUV39H2Q9H5I1 410 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 GLOD4Q9HC38 313 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 SCUBE2Q9NQ36 999 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 HOMER3Q9NSC5 361 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 FBXL12Q9NXK8 326 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 TRHDEQ9UKU6 1024 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 EML5Q05BV3 1969 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 A0A1W2PP55 124 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 HTRA2O43464 458 aaPredicted RBP12.6□□□□□ -0.39
KARS-204ENST00000564578 GCATO75600 419 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 MT-CYBP00156 380 aaPredicted RBP12.6□□□□□ -0.39
KARS-204ENST00000564578 NFKB1P19838 968 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 P2RY2P41231 377 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 MAPK8P45983 427 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 SKOR1P84550 965 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 RAD51Q06609 339 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 TCF15Q12870 199 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 TRAF2Q12933 501 aa12.6□□□□□ -0.39
KARS-204ENST00000564578 FAM46CQ5VWP2 391 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms