RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 TTLL3Q9Y4R7 772 aa13.09□□□□□ -0.31
SPG7-209ENST00000564047 COL4A2P08572 1712 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 ESYT3A0FGR9 886 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 GOLGA6CA6NDK9 693 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 GOLGA6BA6NDN3 693 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 ERI2A8K979 691 aaKnown RBP13.08□□□□□ -0.32
SPG7-209ENST00000564047 E7EVH7 732 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 MAN2B1O00754 1011 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 NPC1O15118 1278 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 PSMD3O43242 534 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 ZNF821O75541 412 aaPredicted RBP13.08□□□□□ -0.32
SPG7-209ENST00000564047 ANXA9O76027 345 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 GSRP00390 522 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 PDGFBP01127 241 aaPredicted RBP13.08□□□□□ -0.32
SPG7-209ENST00000564047 GOLGA6DP0CG33 693 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 DRD1P21728 446 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 RGRP47804 291 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 GEMP55040 296 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 MAXP61244 160 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 CDK16Q00536 496 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 DSC2Q02487 901 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 CAV1Q03135 178 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 NIPAL4Q0D2K0 466 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 CUL1Q13616 776 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 MORF4L2Q15014 288 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 DLG2Q15700 870 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 SLC14A2Q15849 920 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 TMEM196Q5HYL7 178 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 RNASEH2BQ5TBB1 312 aaKnown RBP13.08□□□□□ -0.32
SPG7-209ENST00000564047 FAXCQ5TGI0 409 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 HIBCHQ6NVY1 386 aaPredicted RBP13.08□□□□□ -0.32
SPG7-209ENST00000564047 HOOK3Q86VS8 718 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 PPIL6Q8IXY8 311 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 PLPP6Q8IY26 295 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 TAB3Q8N5C8 712 aaPredicted RBP13.08□□□□□ -0.32
SPG7-209ENST00000564047 NAT8LQ8N9F0 302 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 OR2AP1Q8NGE2 309 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 KCNV2Q8TDN2 545 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 SORCS1Q8WY21 1168 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 CPT1BQ92523 772 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 TADA1Q96BN2 335 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 NUDCD1Q96RS6 583 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 SEMA3CQ99985 751 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 HINFPQ9BQA5 517 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 GORASP1Q9BQQ3 440 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 VPS45Q9NRW7 570 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 GOLGA6AQ9NYA3 693 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 THAP10Q9P2Z0 257 aaPredicted RBP13.08□□□□□ -0.32
SPG7-209ENST00000564047 NUP205Q92621 2012 aa13.08□□□□□ -0.32
SPG7-209ENST00000564047 NCOR2Q9Y618 2525 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 K7EQS6 105 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 INSIG1O15503 277 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 AP2A1O95782 977 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 IGSF6O95976 241 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 HNRNPLP14866 589 aaKnown RBP eCLIP13.07□□□□□ -0.32
SPG7-209ENST00000564047 TPSB2P20231 275 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 MAPK8P45983 427 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 SCNN1BP51168 640 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 ITGA8P53708 1063 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 AP1S1P61966 158 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 SNRPD1P62314 119 aaKnown RBP13.07□□□□□ -0.32
SPG7-209ENST00000564047 SKOR1P84550 965 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 PRKCQQ04759 706 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 GRSF1Q12849 480 aaKnown RBP eCLIP13.07□□□□□ -0.32
SPG7-209ENST00000564047 MPP3Q13368 585 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 KCNJ11Q14654 390 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 PON2Q15165 354 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 TRADDQ15628 312 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 TPSAB1Q15661 275 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 MLF2Q15773 248 aaPredicted RBP13.07□□□□□ -0.32
SPG7-209ENST00000564047 ACCSLQ4AC99 568 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 CARD16Q5EG05 197 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 DGKKQ5KSL6 1271 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 FSTL4Q6MZW2 842 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 TPRG1Q6ZUI0 275 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 PRPF39Q86UA1 669 aaKnown RBP13.07□□□□□ -0.32
SPG7-209ENST00000564047 SFTPA1Q8IWL2 248 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 SPATA22Q8NHS9 363 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 FRS2Q8WU20 508 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 FAM3CQ92520 227 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 EZH1Q92800 747 aaPredicted RBP13.07□□□□□ -0.32
SPG7-209ENST00000564047 ART4Q93070 314 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 OXNAD1Q96HP4 312 aaPredicted RBP13.07□□□□□ -0.32
SPG7-209ENST00000564047 EXOC2Q96KP1 924 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 GDAP1L1Q96MZ0 367 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 MLPHQ9BV36 600 aaPredicted RBP13.07□□□□□ -0.32
SPG7-209ENST00000564047 SCUBE2Q9NQ36 999 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 WNT16Q9UBV4 365 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 FAM153AQ9UHL3 310 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 ANAPC5Q9UJX4 755 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 SHOC2Q9UQ13 582 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 CACNA1GO43497 2377 aa13.07□□□□□ -0.32
SPG7-209ENST00000564047 KIAA1549LQ6ZVL6 1849 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 MYOFQ9NZM1 2061 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 TICRRQ7Z2Z1 1910 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 SHISA7A6NL88 538 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 TTC34A8MYJ7 566 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 F5H423 210 aaPredicted RBP13.06□□□□□ -0.32
SPG7-209ENST00000564047 TP73O15350 636 aa13.06□□□□□ -0.32
SPG7-209ENST00000564047 SUN1O94901 812 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms