RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 APOBEC3BQ9UH17 382 aaKnown RBP16.23■□□□□ 0.19
RNF40-205ENST00000563909 SLC25A13Q9UJS0 675 aa16.23■□□□□ 0.19
RNF40-205ENST00000563909 CSMD1Q96PZ7 3565 aa16.23■□□□□ 0.19
RNF40-205ENST00000563909 POLQO75417 2590 aa16.23■□□□□ 0.19
RNF40-205ENST00000563909 A0A1W2PQM1 296 aa16.22■□□□□ 0.19
RNF40-205ENST00000563909 C9orf172C9J069 976 aa16.22■□□□□ 0.19
RNF40-205ENST00000563909 CTSLP07711 333 aa16.22■□□□□ 0.19
RNF40-205ENST00000563909 CD19P15391 556 aa16.22■□□□□ 0.19
RNF40-205ENST00000563909 NR1I3Q14994 352 aa16.22■□□□□ 0.19
RNF40-205ENST00000563909 SYCP1Q15431 976 aa16.22■□□□□ 0.19
RNF40-205ENST00000563909 KLHDC7AQ5VTJ3 777 aa16.22■□□□□ 0.19
RNF40-205ENST00000563909 KCTD13Q8WZ19 329 aa16.22■□□□□ 0.19
RNF40-205ENST00000563909 RNF34Q969K3 372 aa16.22■□□□□ 0.19
RNF40-205ENST00000563909 NAP1L5Q96NT1 182 aaPredicted RBP16.22■□□□□ 0.19
RNF40-205ENST00000563909 CPEB1Q9BZB8 566 aaKnown RBP16.22■□□□□ 0.19
RNF40-205ENST00000563909 SIX2Q9NPC8 291 aa16.22■□□□□ 0.19
RNF40-205ENST00000563909 XPO7Q9UIA9 1087 aaKnown RBP16.22■□□□□ 0.19
RNF40-205ENST00000563909 DAAM1Q9Y4D1 1078 aa16.22■□□□□ 0.19
RNF40-205ENST00000563909 OTOGQ6ZRI0 2925 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 SCN8AQ9UQD0 1980 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 A1L4Q6 167 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 PIK3R2O00459 728 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 FPGTO14772 594 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 TEX33O43247 280 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 TPM3P06753 285 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 SETSIPP0DME0 302 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 CD82P27701 267 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 CHRNA3P32297 505 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 VASPP50552 380 aaPredicted RBP16.21■□□□□ 0.19
RNF40-205ENST00000563909 PLK1P53350 603 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 RPS21P63220 83 aaKnown RBP16.21■□□□□ 0.19
RNF40-205ENST00000563909 FGL2Q14314 439 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 FHL5Q5TD97 284 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 RAP1GAP2Q684P5 730 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 ZNF787Q6DD87 383 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 ERN2Q76MJ5 926 aaKnown RBP16.21■□□□□ 0.19
RNF40-205ENST00000563909 CIR1Q86X95 450 aaPredicted RBP16.21■□□□□ 0.19
RNF40-205ENST00000563909 SCML4Q8N228 414 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 UBR7Q8N806 425 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 KAT5Q92993 513 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 TMEM159Q96B96 161 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 KREMEN1Q96MU8 473 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 LRRC61Q9BV99 259 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 RBSNQ9H1K0 784 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 SIRPGQ9P1W8 387 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 DNAJC12Q9UKB3 198 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 TLR6Q9Y2C9 796 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 SIK3Q9Y2K2 1263 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 FARP1Q9Y4F1 1045 aaPredicted RBP16.21■□□□□ 0.19
RNF40-205ENST00000563909 PCDHB4Q9Y5E5 795 aa16.21■□□□□ 0.19
RNF40-205ENST00000563909 CBFA2T2O43439 604 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 KRT7P08729 469 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 VDRP11473 427 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 TSHRP16473 764 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 TACR2P21452 398 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 MLLT10P55197 1068 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 ARHGAP44Q17R89 818 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 DPY19L2P1Q6NXN4 242 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 GJB7Q6PEY0 223 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 CHSY1Q86X52 802 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 GAS2L3Q86XJ1 694 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 CCAR2Q8N163 923 aaKnown RBP16.2■□□□□ 0.18
RNF40-205ENST00000563909 ARL10Q8N8L6 244 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 TMIEQ8NEW7 156 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 NEK11Q8NG66 645 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 SSC4DQ8WTU2 575 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 CMKLR1Q99788 373 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 SLC13A1Q9BZW2 595 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 CLPBQ9H078 707 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 LRRN3Q9H3W5 708 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 IFNKQ9P0W0 207 aa16.2■□□□□ 0.18
RNF40-205ENST00000563909 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.19■□□□□ 0.18
RNF40-205ENST00000563909 STMND1H3BQB6 276 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 RNF103O00237 685 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 O00370 1275 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 LTFP02788 710 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 UCHL3P15374 230 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 ELAVL4P26378 380 aaKnown RBP16.19■□□□□ 0.18
RNF40-205ENST00000563909 UQCRFS1P47985 274 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 RGS7P49802 495 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 KLK7P49862 253 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 ATP1A2P50993 1020 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 APBA1Q02410 837 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 ZFP36L1Q07352 338 aaKnown RBP16.19■□□□□ 0.18
RNF40-205ENST00000563909 FAXCQ5TGI0 409 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 TMEM164Q5U3C3 297 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 TMEM270Q6UE05 265 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 PHACTR4Q8IZ21 702 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 SH2D3CQ8N5H7 860 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 KYQ8NBH2 561 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 DQX1Q8TE96 717 aaKnown RBP16.19■□□□□ 0.18
RNF40-205ENST00000563909 IRGQQ8WZA9 623 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 NKD1Q969G9 470 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 ABHD17AQ96GS6 310 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 SLC39A13Q96H72 371 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 FEM1CQ96JP0 617 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 SERPINB11Q96P15 392 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 FEM1AQ9BSK4 669 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 HDAC8Q9BY41 377 aa16.19■□□□□ 0.18
RNF40-205ENST00000563909 FAM207AQ9NSI2 230 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms