RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 MGAT5Q09328 741 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 CYTH1Q15438 398 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 DLG2Q15700 870 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 SPANXN3Q5MJ09 141 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 TEDDM1Q5T9Z0 273 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 TMC5Q6UXY8 1006 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 BLOC1S5Q8TDH9 187 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 DENND1AQ8TEH3 1009 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 GDPD5Q8WTR4 605 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 CDKL2Q92772 493 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 RPL10LQ96L21 214 aaKnown RBP11□□□□□ -0.65
SNRPA1-211ENST00000560433 FEM1AQ9BSK4 669 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 HTATIP2Q9BUP3 242 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 TM6SF2Q9BZW4 377 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 FGFR1OP2Q9NVK5 253 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 TMEM51Q9NW97 253 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 TXNDC16Q9P2K2 825 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 TBC1D30Q9Y2I9 924 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 ILVBLA1L0T0 632 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 OR51F1A6NGY5 319 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 TPP1O14773 563 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 TRIM24O15164 1050 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 LUC7L3O95232 432 aaKnown RBP11□□□□□ -0.65
SNRPA1-211ENST00000560433 ASMTLO95671 621 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 FAM107AO95990 144 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 ALDOAP04075 364 aaKnown RBP11□□□□□ -0.65
SNRPA1-211ENST00000560433 PDHA1P08559 390 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 GSTA2P09210 222 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 PTPN2P17706 415 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 GKP32189 559 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 CD70P32970 193 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 DNAJC3Q13217 504 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 RASA2Q15283 850 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 PCID2Q5JVF3 399 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 ATXN7L2Q5T6C5 722 aaPredicted RBP11□□□□□ -0.65
SNRPA1-211ENST00000560433 PKN3Q6P5Z2 889 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 LDB1Q86U70 411 aaPredicted RBP11□□□□□ -0.65
SNRPA1-211ENST00000560433 CCNJLQ8IV13 435 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 GPR65Q8IYL9 337 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 CENPTQ96BT3 561 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 ABHD8Q96I13 439 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 TGS1Q96RS0 853 aaKnown RBP11□□□□□ -0.65
SNRPA1-211ENST00000560433 NAT9Q9BTE0 207 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 MECRQ9BV79 373 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 PPCSQ9HAB8 311 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 SLCO1B3Q9NPD5 702 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 STK39Q9UEW8 545 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 STOML2Q9UJZ1 356 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 LSM7Q9UK45 103 aaKnown RBP11□□□□□ -0.65
SNRPA1-211ENST00000560433 ARL5AQ9Y689 179 aa11□□□□□ -0.65
SNRPA1-211ENST00000560433 PRPF4O43172 522 aaKnown RBP eCLIP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 PSMD3O43242 534 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 SMAD6O43541 496 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 BNIP3LO60238 219 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 KRT38O76015 456 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 ITGA2BP08514 1039 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 DRD4P21917 467 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 ARNTP27540 789 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 SLC7A9P82251 487 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 MPP1Q00013 466 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 PDE1BQ01064 536 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 SEPT7Q16181 437 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 ACBD5Q5T8D3 534 aaPredicted RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 C16orf46Q6P387 395 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 MARK2Q7KZI7 788 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 SETD3Q86TU7 594 aaPredicted RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 TMEM25Q86YD3 366 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 KLHDC8BQ8IXV7 354 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 NDUFAF2Q8N183 169 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 ITFG1Q8TB96 612 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 CKAP2Q8WWK9 683 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 USP13Q92995 863 aaPredicted RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 IFT43Q96FT9 208 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 KIFC1Q9BW19 673 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 ACE2Q9BYF1 805 aaPredicted RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 IGFLR1Q9H665 355 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 SUDS3Q9H7L9 328 aaPredicted RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 ZNF358Q9NW07 568 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 ZNF180Q9UJW8 692 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 MAFFQ9ULX9 164 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 MTO1Q9Y2Z2 717 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 TCAF1Q9Y4C2 921 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 TYW5A2RUC4 315 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 EPOPA6NHQ4 379 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 A6NNZ2 444 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 C5orf67F2Z3F1 127 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 COPEO14579 308 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 AURKAO14965 403 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 ZNF189O75820 626 aaPredicted RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 TMCC1O94876 653 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 ATXN1LP0C7T5 689 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 SLC8A1P32418 973 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 NRIP1P48552 1158 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 SERPINH1P50454 418 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 MTA1Q13330 715 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 TUBB8Q3ZCM7 444 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 HHATQ5VTY9 493 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 HTR3DQ70Z44 454 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 CHST9Q7L1S5 443 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 NAT16Q8N8M0 369 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms