RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 CDKL1Q00532 357 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 OTUD4Q01804 1114 aaKnown RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ITKQ08881 620 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 TRAP1Q12931 704 aaKnown RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 DPYSL3Q14195 570 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ZNF460Q14592 562 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 NOMO1Q15155 1222 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 PCBP1Q15365 356 aaKnown RBP eCLIP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 SF1Q15637 639 aaKnown RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 TPSAB1Q15661 275 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 RGS21Q2M5E4 152 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 FAM47CQ5HY64 1035 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 KAZNQ674X7 775 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 STEAP4Q687X5 459 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 KRT80Q6KB66 452 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 DNAJC24Q6P3W2 148 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 PKN3Q6P5Z2 889 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 IYDQ6PHW0 289 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 FRMD7Q6ZUT3 714 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 DENND5BQ6ZUT9 1274 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 MIER3Q7Z3K6 550 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 FGD2Q7Z6J4 655 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 CDH24Q86UP0 819 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 TTC30AQ86WT1 665 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 HPS6Q86YV9 775 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 UNC5BQ8IZJ1 945 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 TTC30BQ8N4P2 665 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 DTWD1Q8N5C7 304 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 CNTD1Q8N815 330 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ANKFN1Q8N957 763 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 KYQ8NBH2 561 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 PCYOX1LQ8NBM8 494 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 GMCL1P1Q8NEA9 526 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 TBC1D15Q8TC07 691 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ACTL9Q8TC94 416 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 PDCD6IPQ8WUM4 868 aaKnown RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 KCTD13Q8WZ19 329 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ANKRD36BP1Q96IX9 119 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ZNF778Q96MU6 729 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ZNF641Q96N77 438 aaPredicted RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ZMAT2Q96NC0 199 aaKnown RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 PPP1R10Q96QC0 940 aaKnown RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 RMDN3Q96TC7 470 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 FERMT1Q9BQL6 677 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 EBF4Q9BQW3 602 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 C11orf70Q9BRQ4 267 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 CBWD1Q9BRT8 395 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 TMEM121Q9BTD3 319 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 C1orf50Q9BV19 199 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 DRC3Q9H069 523 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 IKZF4Q9H2S9 585 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 C12orf65Q9H3J6 166 aaKnown RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 POPDC2Q9HBU9 364 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 TRPC7Q9HCX4 862 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 FAM105AQ9NUU6 356 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 SELENONQ9NZV5 590 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 CGGBP1Q9UFW8 167 aaPredicted RBP6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 SERPINB13Q9UIV8 391 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ADAM28Q9UKQ2 775 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 ERGIC3Q9Y282 383 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 RNF11Q9Y3C5 154 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 PCDHB12Q9Y5F1 795 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 LTBP1Q14766 1721 aa6.05□□□□□ -1.44
SNRPA1-209ENST00000560307 CNTNAP4Q9C0A0 1308 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 KRTAP9-7A8MTY7 169 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 KPNA7A9QM74 516 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ZNF487B1APH4 448 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 PSMD12O00232 456 aaPredicted RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 LSM1O15116 133 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 PFDN6O15212 129 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 DLX3O60479 287 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 PLIN3O60664 434 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 EFCAB14O75071 495 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 BANF1O75531 89 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 TOM1L1O75674 476 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 RASGRP1O95267 797 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 IFNB1P01574 187 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 GSTT2P0CG29 244 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 GSTT2BP0CG30 244 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 RALBP11234 206 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 CYP2C9P11712 490 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 POLR2EP19388 210 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ACO1P21399 889 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 MYF6P23409 242 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 SHMT1P34896 483 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ECI1P42126 302 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 CCR3P51677 355 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ZNF132P52740 706 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 TBX4P57082 545 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 PSMC5P62195 406 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 YWHAZP63104 245 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ROR1Q01973 937 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 GALNT2Q10471 571 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ITGA7Q13683 1181 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 TUBA3CQ13748 450 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 TFDP2Q14188 446 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 PCLAFQ15004 111 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 PSMD6Q15008 389 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ABCB5Q2M3G0 1257 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 MGAT5BQ3V5L5 792 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms