RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 RHOQP17081 205 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 JUNDP17535 347 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 TGM2P21980 687 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 ADRA1BP35368 520 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 ATP11AP98196 1134 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 EIF2B5Q13144 721 aaKnown RBP13.3□□□□□ -0.28
TPM1-220ENST00000559556 SGCGQ13326 291 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 ISXQ2M1V0 245 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 DPCR1Q3MIW9 517 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 RAB6CQ53S08 254 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 BROXQ5VW32 411 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 NAA35Q5VZE5 725 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 GUSBP11Q6P575 273 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 ZNF677Q86XU0 584 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 EMC1Q8N766 993 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 OR2AP1Q8NGE2 309 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 OR6K2Q8NGY2 324 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 CPA5Q8WXQ8 436 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 GRAMD1AQ96CP6 724 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 TBATAQ96M53 351 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 BOCQ9BWV1 1114 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 OSBPL1AQ9BXW6 950 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 RAB6CQ9H0N0 254 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 ABCG4Q9H172 646 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 MAGEH1Q9H213 219 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 THSD1Q9NS62 852 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 ITM2BQ9Y287 266 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 SSUH2Q9Y2M2 353 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 LRRK2Q5S007 2527 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 PRRC2CQ9Y520 2896 aaKnown RBP13.29□□□□□ -0.28
TPM1-220ENST00000559556 A0A1W2PNU3 283 aaPredicted RBP13.29□□□□□ -0.28
TPM1-220ENST00000559556 FAM72CH0Y354 149 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 NEMP1O14524 444 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 AREL1O15033 823 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 TCEA3O75764 348 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 UGT2B4P06133 528 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 PLA2G2AP14555 144 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 MMP8P22894 467 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 ERCC5P28715 1186 aaPredicted RBP13.29□□□□□ -0.28
TPM1-220ENST00000559556 GKP32189 559 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 IGFALSP35858 605 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 PTPN9P43378 593 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 SNRPD1P62314 119 aaKnown RBP13.29□□□□□ -0.28
TPM1-220ENST00000559556 SKOR1P84550 965 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 POLD3Q15054 466 aaPredicted RBP13.29□□□□□ -0.28
TPM1-220ENST00000559556 CDKN3Q16667 212 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 CDO1Q16878 200 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 C15orf59Q2T9L4 293 aaPredicted RBP13.29□□□□□ -0.28
TPM1-220ENST00000559556 DEFB133Q30KQ1 61 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 ARL13BQ3SXY8 428 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 HSP90AA4PQ58FG1 418 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 C3orf38Q5JPI3 329 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 FAM72AQ5TYM5 149 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 FAM72DQ6L9T8 149 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 STRADAQ7RTN6 431 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 EFL1Q7Z2Z2 1120 aaKnown RBP13.29□□□□□ -0.28
TPM1-220ENST00000559556 FAM72BQ86X60 149 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 TPCN2Q8NHX9 752 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 SNRNP27Q8WVK2 155 aaKnown RBP13.29□□□□□ -0.28
TPM1-220ENST00000559556 BTN2A2Q8WVV5 523 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 KCNE4Q8WWG9 221 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 CENPTQ96BT3 561 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 NAF1Q96HR8 494 aaKnown RBP13.29□□□□□ -0.28
TPM1-220ENST00000559556 IL12RB2Q99665 862 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 STK33Q9BYT3 514 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 DPH1Q9BZG8 443 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 OSBPL2Q9H1P3 480 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 APOBEC3BQ9UH17 382 aaKnown RBP13.29□□□□□ -0.28
TPM1-220ENST00000559556 IPO11Q9UI26 975 aaKnown RBP13.29□□□□□ -0.28
TPM1-220ENST00000559556 NOCTQ9UK39 431 aaKnown RBP13.29□□□□□ -0.28
TPM1-220ENST00000559556 HPCAL4Q9UM19 191 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 SATB2Q9UPW6 733 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 ENTPD2Q9Y5L3 495 aa13.29□□□□□ -0.28
TPM1-220ENST00000559556 CPED1A4D0V7 1026 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 ZSCAN5CA6NGD5 496 aaPredicted RBP13.28□□□□□ -0.28
TPM1-220ENST00000559556 C2CD4BA6NLJ0 364 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 LMO7DNF2Z398 122 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 KRIT1O00522 736 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 LRIG2O94898 1065 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 POP4O95707 220 aaKnown RBP13.28□□□□□ -0.28
TPM1-220ENST00000559556 CYP1A1P04798 512 aaPredicted RBP13.28□□□□□ -0.28
TPM1-220ENST00000559556 SDC4P31431 198 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 THOP1P52888 689 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 YPEL5P62699 121 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 RHDQ02161 417 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 PTK2BQ14289 1009 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 NR0B2Q15466 257 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 CCDC14Q49A88 953 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 C6orf132Q5T0Z8 1188 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 RWDD4Q6NW29 188 aaKnown RBP13.28□□□□□ -0.28
TPM1-220ENST00000559556 MACC1Q6ZN28 852 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 SLC35F3Q8IY50 421 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 PHACTR4Q8IZ21 702 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 RBFAQ8N0V3 343 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 RYBPQ8N488 228 aaPredicted RBP13.28□□□□□ -0.28
TPM1-220ENST00000559556 LMX1AQ8TE12 382 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 SLC20A1Q8WUM9 679 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 RXFP2Q8WXD0 754 aa13.28□□□□□ -0.28
TPM1-220ENST00000559556 CENPIQ92674 756 aaPredicted RBP13.28□□□□□ -0.28
TPM1-220ENST00000559556 TBC1D31Q96DN5 1066 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms