RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 TM6SF2Q9BZW4 377 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 KLC2Q9H0B6 622 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 SMOC1Q9H4F8 434 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 SP110Q9HB58 689 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 PCDH18Q9HCL0 1135 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 DKK3Q9UBP4 350 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 SERGEFQ9UGK8 458 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 IPO11Q9UI26 975 aaKnown RBP8.61□□□□□ -1.03
TPM1-213ENST00000558400 PCDHA13Q9Y5I0 950 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 WASF2Q9Y6W5 498 aa8.61□□□□□ -1.03
TPM1-213ENST00000558400 SETXQ7Z333 2677 aaKnown RBP8.6□□□□□ -1.03
TPM1-213ENST00000558400 A0A1W2PQ67 120 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 C16orf96A6NNT2 1141 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 UPK3BL1B0FP48 263 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 ZNF487B1APH4 448 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 C10orf142B7Z368 130 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 UPK3BL2E5RIL1 263 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 PRAMEF26H0Y7S4 382 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 J3KR12 359 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 VILLO15195 856 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 TSPAN6O43657 245 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 PCDH8O95206 1070 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 NDUFA10O95299 355 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 CER1O95813 267 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 IGHV4-34P06331 123 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 ZNF883P0CG24 379 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 TCF4P15884 667 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 MX2P20592 715 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 FECHP22830 423 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 CES1P23141 567 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 IL4RP24394 825 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 CD38P28907 300 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 PMLP29590 882 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 CSNK1EP49674 416 aaKnown RBP8.6□□□□□ -1.03
TPM1-213ENST00000558400 ARSEP51690 589 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 C21orf59P57076 290 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 POLR2LP62875 67 aaKnown RBP8.6□□□□□ -1.03
TPM1-213ENST00000558400 RPS21P63220 83 aaKnown RBP8.6□□□□□ -1.03
TPM1-213ENST00000558400 SHC2P98077 582 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 HNRNPDQ14103 355 aaKnown RBP8.6□□□□□ -1.03
TPM1-213ENST00000558400 SUZ12Q15022 739 aaKnown RBP8.6□□□□□ -1.03
TPM1-213ENST00000558400 CYTH1Q15438 398 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 ANKRD20A8PQ5CZ79 823 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 RALGPS1Q5JS13 557 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 PIP5KL1Q5T9C9 394 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 AGBL4Q5VU57 503 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 TXNRD3NBQ6F5E7 133 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 KIAA1161Q6NSJ0 714 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 GDPD4Q6W3E5 623 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 ADAT2Q7Z6V5 191 aaKnown RBP8.6□□□□□ -1.03
TPM1-213ENST00000558400 TTC7BQ86TV6 843 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 IQCHQ86VS3 1027 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 ARHGAP12Q8IWW6 846 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 RHOT1Q8IXI2 618 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 ZCCHC9Q8N567 271 aaKnown RBP8.6□□□□□ -1.03
TPM1-213ENST00000558400 MFSD2AQ8NA29 543 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 GRIN3AQ8TCU5 1115 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 UBE2Q2Q8WVN8 375 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 SERAC1Q96JX3 654 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 PSKH2Q96QS6 385 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 TUBGCP5Q96RT8 1024 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 GTPBP2Q9BX10 602 aaKnown RBP8.6□□□□□ -1.03
TPM1-213ENST00000558400 CALN1Q9BXU9 219 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 SLC32A1Q9H598 525 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 ZDHHC6Q9H6R6 413 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 PDFQ9HBH1 243 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 TM9SF3Q9HD45 589 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 RXFP3Q9NSD7 469 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 DNAAF2Q9NVR5 837 aaKnown RBP8.6□□□□□ -1.03
TPM1-213ENST00000558400 DDX56Q9NY93 547 aaKnown RBP8.6□□□□□ -1.03
TPM1-213ENST00000558400 SEPT3Q9UH03 358 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 ASPMQ8IZT6 3477 aa8.6□□□□□ -1.03
TPM1-213ENST00000558400 ATXN2Q99700 1313 aaKnown RBP8.59□□□□□ -1.03
TPM1-213ENST00000558400 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.59□□□□□ -1.03
TPM1-213ENST00000558400 TMEM110-MUSTN1A8MSY1 372 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 NEMP1O14524 444 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 PROS1P07225 676 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 CEACAM1P13688 526 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 ADRB3P13945 408 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 ZFXP17010 805 aaPredicted RBP8.59□□□□□ -1.03
TPM1-213ENST00000558400 CSRP1P21291 193 aaKnown RBP8.59□□□□□ -1.03
TPM1-213ENST00000558400 XPAP23025 273 aaPredicted RBP8.59□□□□□ -1.03
TPM1-213ENST00000558400 KDELR1P24390 212 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 CCNCP24863 283 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 NFKBIAP25963 317 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 SGCGQ13326 291 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 DPYSL3Q14195 570 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 LBRQ14739 615 aaKnown RBP8.59□□□□□ -1.03
TPM1-213ENST00000558400 PAFAH1B3Q15102 231 aaKnown RBP8.59□□□□□ -1.03
TPM1-213ENST00000558400 UAP1L1Q3KQV9 507 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 POM121L1PQ3SYA9 428 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 ATP13A4Q4VNC1 1196 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 CFAP58Q5T655 872 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 MARC1Q5VT66 337 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 NAPEPLDQ6IQ20 393 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 TIGD7Q6NT04 549 aaPredicted RBP8.59□□□□□ -1.03
TPM1-213ENST00000558400 BRAT1Q6PJG6 821 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 LEKR1Q6ZMV7 388 aa8.59□□□□□ -1.03
TPM1-213ENST00000558400 BZW1Q7L1Q6 419 aaKnown RBP8.59□□□□□ -1.03
TPM1-213ENST00000558400 SRLQ86TD4 932 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms