RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ZNF689Q96CS4 500 aaPredicted RBP6.44□□□□□ -1.38
RTF1-204ENST00000558117 KAZALD1Q96I82 304 aa6.44□□□□□ -1.38
RTF1-204ENST00000558117 ZNF668Q96K58 619 aaPredicted RBP6.44□□□□□ -1.38
RTF1-204ENST00000558117 SGCZQ96LD1 299 aa6.44□□□□□ -1.38
RTF1-204ENST00000558117 ELAC2Q9BQ52 826 aaKnown RBP6.44□□□□□ -1.38
RTF1-204ENST00000558117 MAGEB5Q9BZ81 275 aa6.44□□□□□ -1.38
RTF1-204ENST00000558117 MAF1Q9H063 256 aa6.44□□□□□ -1.38
RTF1-204ENST00000558117 ZCWPW1Q9H0M4 648 aa6.44□□□□□ -1.38
RTF1-204ENST00000558117 SLC25A32Q9H2D1 315 aa6.44□□□□□ -1.38
RTF1-204ENST00000558117 AMFRQ9UKV5 643 aa6.44□□□□□ -1.38
RTF1-204ENST00000558117 RAB23Q9ULC3 237 aa6.44□□□□□ -1.38
RTF1-204ENST00000558117 SLC27A6Q9Y2P4 619 aa6.44□□□□□ -1.38
RTF1-204ENST00000558117 PCDHGB2Q9Y5G2 931 aa6.44□□□□□ -1.38
RTF1-204ENST00000558117 COMMD10Q9Y6G5 202 aa6.44□□□□□ -1.38
RTF1-204ENST00000558117 DDX49Q9Y6V7 483 aaKnown RBP6.44□□□□□ -1.38
RTF1-204ENST00000558117 ARHGEF17Q96PE2 2063 aaPredicted RBP6.44□□□□□ -1.38
RTF1-204ENST00000558117 FLT1P17948 1338 aa6.44□□□□□ -1.38
RTF1-204ENST00000558117 SETD2Q9BYW2 2564 aaPredicted RBP6.43□□□□□ -1.38
RTF1-204ENST00000558117 LAMA1P25391 3075 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 EXOC3O60645 756 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 FGAP02671 866 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 WEE2P0C1S8 567 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 SRGAP2BP0DMP2 458 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 SERPINB3P29508 390 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 MTHFRP42898 656 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 NOVA1P51513 510 aaKnown RBP6.43□□□□□ -1.38
RTF1-204ENST00000558117 CNTN2Q02246 1040 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 SRSF4Q08170 494 aaKnown RBP6.43□□□□□ -1.38
RTF1-204ENST00000558117 CERKLQ49MI3 558 aaPredicted RBP6.43□□□□□ -1.38
RTF1-204ENST00000558117 DUSP28Q4G0W2 176 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 HSP90AB4PQ58FF6 505 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 PRAMEF17Q5VTA0 474 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 KIAA1614Q5VZ46 1190 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 SNRNP48Q6IEG0 339 aaKnown RBP6.43□□□□□ -1.38
RTF1-204ENST00000558117 MZT2AQ6P582 158 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 TSSK4Q6SA08 328 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 SERPINA13PQ6UXR4 307 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 FAM186BQ8IYM0 893 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 SPICE1Q8N0Z3 855 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 C8orf58Q8NAV2 365 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 GLIS1Q8NBF1 620 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 SEMA6DQ8NFY4 1073 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 DNAAF4Q8WXU2 420 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 NSUN4Q96CB9 384 aaKnown RBP6.43□□□□□ -1.38
RTF1-204ENST00000558117 ZDHHC12Q96GR4 267 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 PNNQ9H307 717 aaKnown RBP6.43□□□□□ -1.38
RTF1-204ENST00000558117 EMSYQ7Z589 1322 aa6.43□□□□□ -1.38
RTF1-204ENST00000558117 ENO4A6NNW6 628 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 M0R3H8 397 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 SNX2O60749 519 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 LDHCP07864 332 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 ZNF853P0CG23 659 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 MYCLP12524 364 aaPredicted RBP6.42□□□□□ -1.38
RTF1-204ENST00000558117 CREB1P16220 341 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 EEF1GP26641 437 aaKnown RBP6.42□□□□□ -1.38
RTF1-204ENST00000558117 MCM5P33992 734 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 HTR7P34969 479 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 DEUP1Q05D60 604 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 BTG3Q14201 252 aaPredicted RBP6.42□□□□□ -1.38
RTF1-204ENST00000558117 SF3A2Q15428 464 aaKnown RBP6.42□□□□□ -1.38
RTF1-204ENST00000558117 AASDHQ4L235 1098 aaPredicted RBP6.42□□□□□ -1.38
RTF1-204ENST00000558117 CES5AQ6NT32 575 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 KIRREL2Q6UWL6 708 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 PTCHD4Q6ZW05 846 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 ATG9AQ7Z3C6 839 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 FBXO16Q8IX29 292 aaPredicted RBP6.42□□□□□ -1.38
RTF1-204ENST00000558117 TERB1Q8NA31 727 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 CCDC150Q8NCX0 1101 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 GJA10Q969M2 543 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 TEX13BQ9BXU2 312 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 CIPCQ9C0C6 399 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 PCDHAC1Q9H158 963 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 ZBTB26Q9HCK0 441 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 SNX15Q9NRS6 342 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 NKX1-2Q9UD57 310 aaPredicted RBP6.42□□□□□ -1.38
RTF1-204ENST00000558117 KLK13Q9UKR3 277 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 PDS5AQ29RF7 1337 aaKnown RBP6.42□□□□□ -1.38
RTF1-204ENST00000558117 POLQO75417 2590 aa6.42□□□□□ -1.38
RTF1-204ENST00000558117 FAM234BA2RU67 622 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 H7C1Q1 480 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 COQ9O75208 318 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 CENPBP07199 599 aaPredicted RBP6.41□□□□□ -1.38
RTF1-204ENST00000558117 IFIT2P09913 472 aaKnown RBP6.41□□□□□ -1.38
RTF1-204ENST00000558117 CDK4P11802 303 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 TDGF1P13385 188 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 ABCB4P21439 1286 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 RBL1P28749 1068 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 SHMT1P34896 483 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 HSPA7P48741 367 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 DIO1P49895 249 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 LMAN2Q12907 356 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 MPEG1Q2M385 716 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 COLEC12Q5KU26 742 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 FAXCQ5TGI0 409 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 ZKSCAN2Q63HK3 967 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 XRRA1Q6P2D8 792 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 ATF7IPQ6VMQ6 1270 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 CCDC28AQ8IWP9 274 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 SAMD3Q8N6K7 520 aa6.41□□□□□ -1.38
RTF1-204ENST00000558117 PNLDC1Q8NA58 520 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms