RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ARHGAP36Q6ZRI8 547 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 TP53INP2Q8IXH6 220 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 NDUFAF2Q8N183 169 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 RYBPQ8N488 228 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-234ENST00000557703 HDDC3Q8N4P3 179 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 GANCQ8TET4 914 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 PBKQ96KB5 322 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 NAP1L3Q99457 506 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-234ENST00000557703 TLR10Q9BXR5 811 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 SUV39H2Q9H5I1 410 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 ZDHHC6Q9H6R6 413 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 RBM22Q9NW64 420 aaKnown RBP eCLIP13.86□□□□□ -0.191e-9■■■■□ 20
SHMT2-234ENST00000557703 SUSD2Q9UGT4 822 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 GMEB2Q9UKD1 530 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 TRHDEQ9UKU6 1024 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 SARDHQ9UL12 918 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 SMG5Q9UPR3 1016 aaKnown RBP13.86□□□□□ -0.19
SHMT2-234ENST00000557703 ATP8A1Q9Y2Q0 1164 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 R4GN57 208 aa13.86□□□□□ -0.19
SHMT2-234ENST00000557703 NYNRINQ9P2P1 1898 aaKnown RBP13.86□□□□□ -0.19
SHMT2-234ENST00000557703 VPS13AQ96RL7 3174 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 ZFHX2Q9C0A1 2572 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-234ENST00000557703 EML5Q05BV3 1969 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 A0A1W2PP55 124 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 TSPAN11A1L157 253 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 CFAP69A5D8W1 941 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 METTL12A8MUP2 240 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 INSIG1O15503 277 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 TSPAN6O43657 245 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 PLRG1O43660 514 aaKnown RBP13.85□□□□□ -0.19
SHMT2-234ENST00000557703 STK10O94804 968 aaKnown RBP13.85□□□□□ -0.19
SHMT2-234ENST00000557703 SEMA4FO95754 770 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 CTSLP07711 333 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 SERPINF2P08697 491 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 STIP1P31948 543 aaKnown RBP13.85□□□□□ -0.19
SHMT2-234ENST00000557703 DRD3P35462 400 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 SCNN1BP51168 640 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 RPL26P61254 145 aaKnown RBP13.85□□□□□ -0.19
SHMT2-234ENST00000557703 DYNLT1P63172 113 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 ELP6Q0PNE2 266 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 AP1B1Q10567 949 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 SLC45A4Q5BKX6 768 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 CFAP58Q5T655 872 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 AADATQ8N5Z0 425 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 CHST14Q8NCH0 376 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 CEP76Q8TAP6 659 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 FAM174AQ8TBP5 190 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 RLN3Q8WXF3 142 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 DNASE2BQ8WZ79 361 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 LGMNQ99538 433 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 HEMGNQ9BXL5 484 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 NEUROG2Q9H2A3 272 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 SCUBE2Q9NQ36 999 aa13.85□□□□□ -0.19
SHMT2-234ENST00000557703 MBD1Q9UIS9 605 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-234ENST00000557703 TTC7AQ9ULT0 858 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-234ENST00000557703 PACSIN2Q9UNF0 486 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-234ENST00000557703 RPL26L1Q9UNX3 145 aaKnown RBP13.85□□□□□ -0.19
SHMT2-234ENST00000557703 BCLAF3A2AJT9 711 aaKnown RBP13.84□□□□□ -0.19
SHMT2-234ENST00000557703 C16orf96A6NNT2 1141 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 PRR5-ARHGAP8B1AHC4 643 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 C10orf142B7Z368 130 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 KCNK3O14649 394 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 HTRA2O43464 458 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-234ENST00000557703 RNGTTO60942 597 aaKnown RBP13.84□□□□□ -0.19
SHMT2-234ENST00000557703 ADRB3P13945 408 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 PRLRP16471 622 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 NUMBP49757 651 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 CNTN1Q12860 1018 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 ATXN7L2Q5T6C5 722 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-234ENST00000557703 AGBL4Q5VU57 503 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 PEAR1Q5VY43 1037 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-234ENST00000557703 NCEH1Q6PIU2 408 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-234ENST00000557703 LEKR1Q6ZMV7 388 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 PRR23BQ6ZRT6 265 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 TRIM69Q86WT6 500 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 CDKL3Q8IVW4 592 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-234ENST00000557703 RAVER1Q8IY67 606 aaKnown RBP13.84□□□□□ -0.19
SHMT2-234ENST00000557703 ACTL9Q8TC94 416 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 GRIN3AQ8TCU5 1115 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 HTR3CQ8WXA8 447 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 ASB12Q8WXK4 309 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 RUBCNQ92622 972 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 ECHDC3Q96DC8 303 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 FEM1CQ96JP0 617 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 TEKT5Q96M29 485 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 QKIQ96PU8 341 aaKnown RBP eCLIP13.84□□□□□ -0.19
SHMT2-234ENST00000557703 SLC6A17Q9H1V8 727 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 VPS45Q9NRW7 570 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 KCTD5Q9NXV2 234 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 EVLQ9UI08 416 aaPredicted RBP13.84□□□□□ -0.19
SHMT2-234ENST00000557703 DNPEPQ9ULA0 475 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 DMTF1Q9Y222 760 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 ACTL7AQ9Y615 435 aa13.84□□□□□ -0.19
SHMT2-234ENST00000557703 THADAQ6YHU6 1953 aa13.83□□□□□ -0.19
SHMT2-234ENST00000557703 SHROOM3Q8TF72 1996 aa13.83□□□□□ -0.19
SHMT2-234ENST00000557703 TRAFD1O14545 582 aaPredicted RBP13.83□□□□□ -0.2
SHMT2-234ENST00000557703 EPN2O95208 641 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 JCHAINP01591 159 aa13.83□□□□□ -0.2
SHMT2-234ENST00000557703 TUBB4AP04350 444 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms