RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 GRIA4P48058 902 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 HADHBP55084 474 aaKnown RBP15.39■□□□□ 0.05
ACTN1-217ENST00000556203 RACK1P63244 317 aaKnown RBP15.39■□□□□ 0.05
ACTN1-217ENST00000556203 BNC1Q01954 994 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 LBRQ14739 615 aaKnown RBP15.39■□□□□ 0.05
ACTN1-217ENST00000556203 PAFAH1B3Q15102 231 aaKnown RBP15.39■□□□□ 0.05
ACTN1-217ENST00000556203 LRRC38Q5VT99 294 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 NEK5Q6P3R8 708 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 ADAT2Q7Z6V5 191 aaKnown RBP15.39■□□□□ 0.05
ACTN1-217ENST00000556203 RHOT1Q8IXI2 618 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 PQLC3Q8N755 202 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 ACRBPQ8NEB7 543 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 ZNF599Q96NL3 588 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 CPEB1Q9BZB8 566 aaKnown RBP15.39■□□□□ 0.05
ACTN1-217ENST00000556203 SEPT3Q9UH03 358 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 REXO2Q9Y3B8 237 aaKnown RBP15.39■□□□□ 0.05
ACTN1-217ENST00000556203 FADS3Q9Y5Q0 445 aa15.39■□□□□ 0.05
ACTN1-217ENST00000556203 ZNF292O60281 2723 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 RCCD1A6NED2 376 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 GOLGA6L6A8MZA4 724 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 TM4SF5O14894 197 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 WNT9AO14904 365 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 MUSKO15146 869 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 MAFKO60675 156 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 OPHN1O60890 802 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 MAP3K6O95382 1288 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 PEX11BO96011 259 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 ABL2P42684 1182 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 SLC10A7Q0GE19 358 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 GALNT2Q10471 571 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 KIF19Q2TAC6 998 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 SETMARQ53H47 684 aaPredicted RBP15.38■□□□□ 0.05
ACTN1-217ENST00000556203 SEL1L3Q68CR1 1132 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 HORMAD1Q86X24 394 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 TMEM139Q8IV31 216 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 KLK6Q92876 244 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 RAB7BQ96AH8 199 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 GOLPH3Q9H4A6 298 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 SALL4Q9UJQ4 1053 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 ANKRD6Q9Y2G4 727 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 ALG6Q9Y672 507 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 CEP192Q8TEP8 1941 aa15.38■□□□□ 0.05
ACTN1-217ENST00000556203 C3orf70A6NLC5 250 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-217ENST00000556203 VILLO15195 856 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 AP1G1O43747 822 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 GJB3O75712 270 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 WNT1P04628 370 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 PRLRP16471 622 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 NUDT1P36639 197 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 GARSP41250 739 aaKnown RBP15.37■□□□□ 0.05
ACTN1-217ENST00000556203 CSNK1DP48730 415 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 RENBPP51606 427 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 C21orf59P57076 290 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 GBE1Q04446 702 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 ZNF235Q14590 738 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 GRM3Q14832 879 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 ZNF284Q2VY69 593 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 HLA-BQ31612 363 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 ODF2Q5BJF6 829 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 LRRC73Q5JTD7 316 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 NAPEPLDQ6IQ20 393 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 IL27RAQ6UWB1 636 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 SRLQ86TD4 932 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 TTC7BQ86TV6 843 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 LRRC49Q8IUZ0 686 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 NSMCE1Q8WV22 266 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 RNF25Q96BH1 459 aaPredicted RBP15.37■□□□□ 0.05
ACTN1-217ENST00000556203 RNF157Q96PX1 679 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 PSKH2Q96QS6 385 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 TUBGCP5Q96RT8 1024 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 GAREM1Q9H706 876 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 IL21RQ9HBE5 538 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 DNAAF2Q9NVR5 837 aaKnown RBP15.37■□□□□ 0.05
ACTN1-217ENST00000556203 DDX56Q9NY93 547 aaKnown RBP15.37■□□□□ 0.05
ACTN1-217ENST00000556203 DKK3Q9UBP4 350 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 ZFR2Q9UPR6 939 aaKnown RBP15.37■□□□□ 0.05
ACTN1-217ENST00000556203 DMTF1Q9Y222 760 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 ITM2BQ9Y287 266 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 SNX11Q9Y5W9 270 aa15.37■□□□□ 0.05
ACTN1-217ENST00000556203 PCDH15Q96QU1 1955 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 A0A1W2PR77 199 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 ZNF487B1APH4 448 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 PRAMEF26H0Y7S4 382 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 NEMP1O14524 444 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 SLC31A1O15431 190 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 PSTPIP1O43586 416 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 CER1O95813 267 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 TIMP2P16035 220 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 KCNA4P22459 653 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 XPAP23025 273 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-217ENST00000556203 CD38P28907 300 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 SCNN1BP51168 640 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 NAP1L1P55209 391 aaKnown RBP15.36■□□□□ 0.05
ACTN1-217ENST00000556203 RPS21P63220 83 aaKnown RBP15.36■□□□□ 0.05
ACTN1-217ENST00000556203 NSUN2Q08J23 767 aaKnown RBP eCLIP15.36■□□□□ 0.05
ACTN1-217ENST00000556203 SLC45A4Q5BKX6 768 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 CFAP58Q5T655 872 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 KIAA1161Q6NSJ0 714 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 C11orf63Q6NUN7 778 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 KIAA1328Q86T90 577 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms