RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 LRRC38Q5VT99 294 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 NEK5Q6P3R8 708 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 GDPD4Q6W3E5 623 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 ARHGAP36Q6ZRI8 547 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 PARS2Q7L3T8 475 aaKnown RBP12.27□□□□□ -0.45
SRP54-206ENST00000555317 DGLUCYQ7Z3D6 616 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 TRIM69Q86WT6 500 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 LRRC49Q8IUZ0 686 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 RAB7BQ96AH8 199 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 SERAC1Q96JX3 654 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 CALR3Q96L12 384 aaKnown RBP12.27□□□□□ -0.45
SRP54-206ENST00000555317 KLHL32Q96NJ5 620 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 ATP13A3Q9H7F0 1226 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 PDFQ9HBH1 243 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 TM9SF3Q9HD45 589 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 FSCN3Q9NQT6 498 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 DLL3Q9NYJ7 618 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 LHX3Q9UBR4 397 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.27□□□□□ -0.45
SRP54-206ENST00000555317 MFHAS1Q9Y4C4 1052 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 PLXNA2O75051 1894 aa12.27□□□□□ -0.45
SRP54-206ENST00000555317 A0A0A6YYK5 440 aaPredicted RBP12.26□□□□□ -0.45
SRP54-206ENST00000555317 C16orf96A6NNT2 1141 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 PSTPIP1O43586 416 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 MFSD11O43934 449 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 MX2P20592 715 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 COMTP21964 271 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 FECHP22830 423 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 KDELR1P24390 212 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 SERPINA4P29622 427 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 HSPA9P38646 679 aaKnown RBP12.26□□□□□ -0.45
SRP54-206ENST00000555317 GRIA4P48058 902 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 CSNK1EP49674 416 aaKnown RBP12.26□□□□□ -0.45
SRP54-206ENST00000555317 LBRQ14739 615 aaKnown RBP12.26□□□□□ -0.45
SRP54-206ENST00000555317 CYTH1Q15438 398 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 KIAA1161Q6NSJ0 714 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 DAAM2Q86T65 1068 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 MINDY1Q8N5J2 469 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 FAM71BQ8TC56 605 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 FAM131CQ96AQ9 280 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 TUBGCP5Q96RT8 1024 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 DMTF1Q9Y222 760 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 ANKRD36A6QL64 1941 aa12.26□□□□□ -0.45
SRP54-206ENST00000555317 PCDH15Q96QU1 1955 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 DOCK9Q9BZ29 2069 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 DCHS1Q96JQ0 3298 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 A0A1B0GVT2 93 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 A0A1W2PQU0 124 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 NRDCO43847 1150 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 BUB1BO60566 1050 aaPredicted RBP12.25□□□□□ -0.45
SRP54-206ENST00000555317 ZFXP17010 805 aaPredicted RBP12.25□□□□□ -0.45
SRP54-206ENST00000555317 IL4RP24394 825 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 MMP13P45452 471 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 SCNN1BP51168 640 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 ARSEP51690 589 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 HADHBP55084 474 aaKnown RBP12.25□□□□□ -0.45
SRP54-206ENST00000555317 RPS21P63220 83 aaKnown RBP12.25□□□□□ -0.45
SRP54-206ENST00000555317 SGCGQ13326 291 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 STAT4Q14765 748 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 IFI16Q16666 785 aaKnown RBP12.25□□□□□ -0.45
SRP54-206ENST00000555317 MARC1Q5VT66 337 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 NCBP2-AS2Q69YL0 99 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 NAPEPLDQ6IQ20 393 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 TIGD7Q6NT04 549 aaPredicted RBP12.25□□□□□ -0.45
SRP54-206ENST00000555317 C11orf63Q6NUN7 778 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 SRLQ86TD4 932 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 TTC7BQ86TV6 843 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 ZSCAN30Q86W11 494 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 HORMAD1Q86X24 394 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 VSIG1Q86XK7 387 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 RFX6Q8HWS3 928 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 TSEN2Q8NCE0 465 aaKnown RBP12.25□□□□□ -0.45
SRP54-206ENST00000555317 ACRBPQ8NEB7 543 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 PCDH19Q8TAB3 1148 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 RAPGEF5Q92565 580 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 FEM1CQ96JP0 617 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 ZNF641Q96N77 438 aaPredicted RBP12.25□□□□□ -0.45
SRP54-206ENST00000555317 SLC6A18Q96N87 628 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 CPEB1Q9BZB8 566 aaKnown RBP12.25□□□□□ -0.45
SRP54-206ENST00000555317 HYOU1Q9Y4L1 999 aa12.25□□□□□ -0.45
SRP54-206ENST00000555317 TP53BP1Q12888 1972 aaPredicted RBP12.25□□□□□ -0.45
SRP54-206ENST00000555317 DCDC2BA2VCK2 349 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 ZNF487B1APH4 448 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 PRAMEF26H0Y7S4 382 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 APOL1O14791 398 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 INSIG1O15503 277 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 LATO43561 262 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 TSPAN6O43657 245 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 AP1G1O43747 822 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 MAGEC1O60732 1142 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 PIGNO95427 931 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 PRLRP16471 622 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 CD38P28907 300 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 AKT2P31751 481 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 GARSP41250 739 aaKnown RBP12.24□□□□□ -0.45
SRP54-206ENST00000555317 CSNK1DP48730 415 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 SUOXP51687 545 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 VAV2P52735 878 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 TAS2R38P59533 333 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 AP1S1P61966 158 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms