RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 THAP2Q9H0W7 228 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 TLE6Q9H808 572 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 PNPLA8Q9NP80 782 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 LUC7LQ9NQ29 371 aaKnown RBP6.57□□□□□ -1.36
SCFD1-212ENST00000554486 GALNT8Q9NY28 637 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 IL37Q9NZH6 218 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 ADAM22Q9P0K1 906 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 CHORDC1Q9UHD1 332 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-212ENST00000554486 ZFP69BQ9UJL9 534 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 INTUQ9ULD6 942 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 INSL5Q9Y5Q6 135 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 NCANO14594 1321 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 OBSL1O75147 1896 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 CDH23Q9H251 3354 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 hCG_2014768A0A024R1R8 64 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 PRRG1O14668 218 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 FFAR3O14843 346 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 PJA2O43164 708 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 GLP2RO95838 553 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 CYP1A2P05177 515 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 CALB1P05937 261 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 CPEP16870 476 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 HMGA1P17096 107 aaKnown RBP6.56□□□□□ -1.36
SCFD1-212ENST00000554486 RRM1P23921 792 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 ARHGAP25P42331 645 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 GLRBP48167 497 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 KCNC1P48547 511 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 NRIP1P48552 1158 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 PGFP49763 221 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 TKTL1P51854 596 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 VAV2P52735 878 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 SLC5A3P53794 718 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 GSCP56915 257 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-212ENST00000554486 SLC8A3P57103 927 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 GPC5P78333 572 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 KRT83P78385 493 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 ALDH6A1Q02252 535 aaKnown RBP6.56□□□□□ -1.36
SCFD1-212ENST00000554486 TWF1Q12792 350 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 HYAL1Q12794 435 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 ZNF268Q14587 947 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-212ENST00000554486 MYBPC3Q14896 1274 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 TCEAL5Q5H9L2 206 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 LIN9Q5TKA1 542 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 KANK2Q63ZY3 851 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 PM20D1Q6GTS8 502 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 PLEKHA7Q6IQ23 1121 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 PPP1R2P3Q6NXS1 205 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 OLFML1Q6UWY5 402 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 CCDC149Q6ZUS6 474 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 FAM183BPQ6ZVS7 135 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 C11orf74Q86VG3 221 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 RASSF3Q86WH2 238 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 SPATS2Q86XZ4 545 aaKnown RBP6.56□□□□□ -1.36
SCFD1-212ENST00000554486 REXO1L1PQ8IX06 675 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 ADGRG2Q8IZP9 1017 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 NUP93Q8N1F7 819 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 SCML4Q8N228 414 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 C17orf53Q8N3J3 647 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-212ENST00000554486 STPG3Q8N7X2 389 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 TP53I13Q8NBR0 393 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-212ENST00000554486 MSANTD4Q8NCY6 345 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 HIPK4Q8NE63 616 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 HDAC7Q8WUI4 952 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 ZCCHC14Q8WYQ9 949 aaKnown RBP6.56□□□□□ -1.36
SCFD1-212ENST00000554486 ZNF653Q96CK0 615 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 CEP295NLQ96MC4 621 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 CDCA3Q99618 268 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-212ENST00000554486 TACO1Q9BSH4 297 aaKnown RBP6.56□□□□□ -1.36
SCFD1-212ENST00000554486 TTLL2Q9BWV7 592 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 ULBP1Q9BZM6 244 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 ZDHHC5Q9C0B5 715 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 MIS12Q9H081 205 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 PLEKHA4Q9H4M7 779 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 LRRC4Q9HBW1 653 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 MAN1C1Q9NR34 630 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 TRIM10Q9UDY6 481 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 SCML2Q9UQR0 700 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 PPP2R2CQ9Y2T4 447 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 MTCH2Q9Y6C9 303 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 DUSP10Q9Y6W6 482 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 C2orf16Q68DN1 1984 aa6.56□□□□□ -1.36
SCFD1-212ENST00000554486 SZT2Q5T011 3432 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 A0A1B0GTL3 188 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 FAM92AA1XBS5 289 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 USP27XA6NNY8 438 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 YJEFN3A6XGL0 299 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 BTNL10A8MVZ5 291 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 E7ENQ6 273 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 GOLGA8SH3BPF8 625 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 K7ESF4 209 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 LINC01565O15544 149 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 RFPL2O75678 378 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 FBXO21O94952 628 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 RTN3O95197 1032 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-212ENST00000554486 IPO7O95373 1038 aaKnown RBP6.55□□□□□ -1.36
SCFD1-212ENST00000554486 ZBED1O96006 694 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 KNG1P01042 644 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 CCDC175P0C221 793 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 CSH1P0DML2 217 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 CSH2P0DML3 217 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms