RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 B3GALT1Q9Y5Z6 326 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 ACTL7AQ9Y615 435 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 CELSR1Q9NYQ6 3014 aa14.67□□□□□ -0.06
VPS29-209ENST00000551655 SETD2Q9BYW2 2564 aaPredicted RBP14.67□□□□□ -0.06
VPS29-209ENST00000551655 A0A0D9SEW6 157 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 M0QYT0 321 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 RNF225M0QZC1 329 aaPredicted RBP14.66□□□□□ -0.06
VPS29-209ENST00000551655 NEMP1O14524 444 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 MAPK13O15264 365 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 AP1G1O43747 822 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 CALUO43852 315 aaPredicted RBP14.66□□□□□ -0.06
VPS29-209ENST00000551655 RAD1O60671 282 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 FBXO21O94952 628 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 PDCP20941 246 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 DNA2P51530 1060 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 HK3P52790 923 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 TEX19Q8NA77 164 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 OR6K2Q8NGY2 324 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 FAXDC2Q96IV6 333 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 EPAS1Q99814 870 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 NUDT22Q9BRQ3 303 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 ST7Q9NRC1 585 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 APPL1Q9UKG1 709 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 TRAF3IP3Q9Y228 551 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 ADGRG4Q8IZF6 3080 aa14.66□□□□□ -0.06
VPS29-209ENST00000551655 ZNF106Q9H2Y7 1883 aaKnown RBP14.65□□□□□ -0.06
VPS29-209ENST00000551655 EIF5BO60841 1220 aaKnown RBP14.65□□□□□ -0.06
VPS29-209ENST00000551655 RHOCP08134 193 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 ALPIP09923 528 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 ITIH2P19823 946 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 RECQLP46063 649 aaPredicted RBP14.65□□□□□ -0.06
VPS29-209ENST00000551655 KRT83P78385 493 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 EIF4EBP2Q13542 120 aaPredicted RBP14.65□□□□□ -0.06
VPS29-209ENST00000551655 TAF5Q15542 800 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 AMZ1Q400G9 498 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 CBWD6Q4V339 395 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 ALFQ53S48 1182 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 CBWD3Q5JTY5 395 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 CBWD5Q5RIA9 395 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 CERCAMQ5T4B2 595 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 LVRNQ6Q4G3 990 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 TMEM270Q6UE05 265 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 MAMDC2Q7Z304 686 aaPredicted RBP14.65□□□□□ -0.06
VPS29-209ENST00000551655 GPBAR1Q8TDU6 330 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 APOBEC4Q8WW27 367 aaKnown RBP14.65□□□□□ -0.06
VPS29-209ENST00000551655 ART4Q93070 314 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 SLC45A3Q96JT2 553 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 HSFY1Q96LI6 401 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 TAAR9Q96RI9 348 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 PPP1R9BQ96SB3 815 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 CDH19Q9H159 772 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 ZDHHC6Q9H6R6 413 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 FAM204AQ9H8W3 233 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 MAGEF1Q9HAY2 307 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 CASS4Q9NQ75 786 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.65□□□□□ -0.06
VPS29-209ENST00000551655 LRIT1Q9P2V4 623 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 MAPK8IP1Q9UQF2 711 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 TBC1D30Q9Y2I9 924 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 SNX10Q9Y5X0 201 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 HS3ST4Q9Y661 456 aa14.65□□□□□ -0.06
VPS29-209ENST00000551655 PRRC2CQ9Y520 2896 aaKnown RBP14.64□□□□□ -0.07
VPS29-209ENST00000551655 SHANK1Q9Y566 2161 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 LOC101059948A0A1B0GTJ6 334 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 EFCAB7A8K855 629 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 B4GAT1O43505 415 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 TSPAN6O43657 245 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 MMP20O60882 483 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 GLB1P16278 677 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 GTF2H1P32780 548 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 PSMC2P35998 433 aaKnown RBP14.64□□□□□ -0.07
VPS29-209ENST00000551655 CCNHP51946 323 aaPredicted RBP14.64□□□□□ -0.07
VPS29-209ENST00000551655 YPEL5P62699 121 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 IRF4Q15306 451 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 C1QL3Q5VWW1 255 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 C16orf46Q6P387 395 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 HEATR4Q86WZ0 1026 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 GKN2Q86XP6 184 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 TP53I13Q8NBR0 393 aaPredicted RBP14.64□□□□□ -0.07
VPS29-209ENST00000551655 GALNT11Q8NCW6 608 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 OR7D4Q8NG98 312 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 ASB12Q8WXK4 309 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 PDXPQ96GD0 296 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 CCDC74BQ96LY2 380 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 HEPHQ9BQS7 1158 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 C2orf49Q9BVC5 232 aaPredicted RBP14.64□□□□□ -0.07
VPS29-209ENST00000551655 SRRTQ9BXP5 876 aaKnown RBP14.64□□□□□ -0.07
VPS29-209ENST00000551655 B3GNT4Q9C0J1 378 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 GPN2Q9H9Y4 310 aaPredicted RBP14.64□□□□□ -0.07
VPS29-209ENST00000551655 SERTAD1Q9UHV2 236 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 FCF1Q9Y324 198 aaKnown RBP14.64□□□□□ -0.07
VPS29-209ENST00000551655 ANKRD36A6QL64 1941 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 NF1P21359 2839 aa14.64□□□□□ -0.07
VPS29-209ENST00000551655 TNRC6AQ8NDV7 1962 aaKnown RBP14.64□□□□□ -0.07
VPS29-209ENST00000551655 ESPL1Q14674 2120 aa14.63□□□□□ -0.07
VPS29-209ENST00000551655 HIVEP3Q5T1R4 2406 aa14.63□□□□□ -0.07
VPS29-209ENST00000551655 C16orf96A6NNT2 1141 aa14.63□□□□□ -0.07
VPS29-209ENST00000551655 B4DGG1 531 aa14.63□□□□□ -0.07
VPS29-209ENST00000551655 RASGRP1O95267 797 aa14.63□□□□□ -0.07
VPS29-209ENST00000551655 ADCY5O95622 1261 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms