RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 OR6Q1Q8NGQ2 317 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 OR10Z1Q8NGY1 313 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ZNF564Q8TBZ8 553 aaPredicted RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 RAB2BQ8WUD1 216 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC20A1Q8WUM9 679 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SNX19Q92543 992 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 CDKL2Q92772 493 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC39A13Q96H72 371 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 EAF1Q96JC9 268 aaPredicted RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 FAM20AQ96MK3 541 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 MBOAT7Q96N66 472 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 KLHL32Q96NJ5 620 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 RPRD1AQ96P16 312 aaPredicted RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 FAM111AQ96PZ2 611 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 EYA3Q99504 573 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 FAM83CQ9BQN1 747 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 EFHD1Q9BUP0 239 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 C1QTNF7Q9BXJ2 289 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 INTS2Q9H0H0 1204 aaKnown RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 GLT8D2Q9H1C3 349 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SLA2Q9H6Q3 261 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SMYD3Q9H7B4 428 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ALG13Q9NP73 1137 aaKnown RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 CD320Q9NPF0 282 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 XPNPEP1Q9NQW7 623 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 C8orf4Q9NR00 106 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 DIABLOQ9NR28 239 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 COMMD8Q9NX08 183 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SNTG2Q9NY99 539 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 GCNT4Q9P109 453 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 TNFRSF10DQ9UBN6 386 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 SARDHQ9UL12 918 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 ARHGAP26Q9UNA1 814 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 CFL2Q9Y281 166 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 TMA7Q9Y2S6 64 aaKnown RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 POLR3KQ9Y2Y1 108 aaPredicted RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 PCDHAC2Q9Y5I4 1007 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 RAD54BQ9Y620 910 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 AUP1Q9Y679 476 aa5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 CICQ96RK0 1608 aaPredicted RBP5.37□□□□□ -1.55
LSM3P2-201ENST00000551246 IQANK1A0A1B0GTG1 560 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 HMX2A2RU54 273 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 I3L4J1 428 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 VWA5AO00534 786 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 ATP2A1O14983 1001 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PSTPIP1O43586 416 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 RFPL2O75678 378 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 DNAJB5O75953 348 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 CDK14O94921 469 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 KCNK2O95069 426 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PDE8BO95263 885 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 TOP3BO95985 862 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 GOT2P00505 430 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 NR3C1P04150 777 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PRKCGP05129 697 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 NFICP08651 508 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 TRAPPC2P0DI81 140 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 TRAPPC2BP0DI82 140 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 MBL2P11226 248 aaPredicted RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 RALBP11234 206 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 FOSL1P15407 271 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 ZNF182P17025 639 aaPredicted RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 NR4A1P22736 598 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 CFL1P23528 166 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC7A1P30825 629 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 POLR2IP36954 125 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 NAMPTP43490 491 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 NOVP48745 357 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 HCAR3P49019 387 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 CASP4P49662 377 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 ERFP50548 548 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 ALDH18A1P54886 795 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 NME5P56597 212 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 SRP54P61011 504 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 FMO1Q01740 532 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC10A2Q12908 348 aaPredicted RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 TRAP1Q12931 704 aaKnown RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PPP2R5DQ14738 602 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 TAZQ16635 292 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 FSCBQ5H9T9 825 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 MDH1BQ5I0G3 518 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 C1orf141Q5JVX7 400 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 BRMS1LQ5PSV4 323 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 GPR107Q5VW38 600 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 IQSEC1Q6DN90 963 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 XAF1Q6GPH4 301 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PLEKHA7Q6IQ23 1121 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 ZNF773Q6PK81 442 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 EPGNQ6UW88 154 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 C16orf89Q6UX73 402 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 CCBE1Q6UXH8 406 aaPredicted RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 ISLR2Q6UXK2 745 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 SLC16A12Q6ZSM3 486 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PRSS48Q7RTY5 328 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 DSG4Q86SJ6 1040 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 AKAP14Q86UN6 197 aa5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.36□□□□□ -1.55
LSM3P2-201ENST00000551246 PGAM4Q8N0Y7 254 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms