RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 BYSLQ13895 437 aaKnown RBP13.2□□□□□ -0.3
RAB5C-206ENST00000550406 MAP7D1Q3KQU3 841 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 ANKRD20A2Q5SQ80 823 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 ANKRD20A1Q5TYW2 823 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 ANKRD20A3Q5VUR7 823 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 PRUNE1Q86TP1 453 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 PRPF39Q86UA1 669 aaKnown RBP13.2□□□□□ -0.3
RAB5C-206ENST00000550406 WDR5BQ86VZ2 330 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 ABCA7Q8IZY2 2146 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 PGBD3Q8N328 593 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 BBS5Q8N3I7 341 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.2□□□□□ -0.3
RAB5C-206ENST00000550406 FAM71DQ8N9W8 422 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 C12orf50Q8NA57 414 aaPredicted RBP13.2□□□□□ -0.3
RAB5C-206ENST00000550406 GLIS1Q8NBF1 620 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 RLN3Q8WXF3 142 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 PRCCQ92733 491 aaPredicted RBP13.2□□□□□ -0.3
RAB5C-206ENST00000550406 TADA1Q96BN2 335 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 RTP4Q96DX8 246 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 CCDC114Q96M63 670 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 GORASP1Q9BQQ3 440 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 PABPC3Q9H361 631 aaKnown RBP13.2□□□□□ -0.3
RAB5C-206ENST00000550406 GLOD4Q9HC38 313 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 ITM2CQ9NQX7 267 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 USP36Q9P275 1121 aaKnown RBP13.2□□□□□ -0.3
RAB5C-206ENST00000550406 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
RAB5C-206ENST00000550406 THADAQ6YHU6 1953 aa13.2□□□□□ -0.3
RAB5C-206ENST00000550406 TNRC6BQ9UPQ9 1833 aaKnown RBP13.19□□□□□ -0.3
RAB5C-206ENST00000550406 CCDC163A0A0D9SF12 145 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 C5orf60A6NFR6 353 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 TRAFD1O14545 582 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-206ENST00000550406 AXIN1O15169 862 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 MTSS1O43312 755 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 GCATO75600 419 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 PRNPP04156 253 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 UGT2B4P06133 528 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 ITGAVP06756 1048 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 NFKB1P19838 968 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 C5AR1P21730 350 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 TPMTP51580 245 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 AP1S1P61966 158 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 SKOR1P84550 965 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 CNTN1Q12860 1018 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 TRAF2Q12933 501 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 ZNF528Q3MIS6 628 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 KIAA1324Q6UXG2 1013 aaKnown RBP13.19□□□□□ -0.3
RAB5C-206ENST00000550406 GDPD4Q6W3E5 623 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 PID1Q7Z2X4 250 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 ZSWIM9Q86XI8 627 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 FAM160A2Q8N612 972 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-206ENST00000550406 PRSS33Q8NF86 280 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 SPATA22Q8NHS9 363 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 CCDC110Q8TBZ0 833 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 FAM131CQ96AQ9 280 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 IMP4Q96G21 291 aaKnown RBP13.19□□□□□ -0.3
RAB5C-206ENST00000550406 LRIG1Q96JA1 1093 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 KLHL32Q96NJ5 620 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 VAT1Q99536 393 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 POLR1EQ9GZS1 481 aaKnown RBP13.19□□□□□ -0.3
RAB5C-206ENST00000550406 SLC25A51Q9H1U9 297 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 SUV39H2Q9H5I1 410 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 BCCIPQ9P287 314 aaKnown RBP eCLIP13.19□□□□□ -0.3
RAB5C-206ENST00000550406 MBD1Q9UIS9 605 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-206ENST00000550406 INVSQ9Y283 1065 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 PCDHGC4Q9Y5F7 938 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 CUL9Q8IWT3 2517 aa13.19□□□□□ -0.3
RAB5C-206ENST00000550406 A0A1W2PP55 124 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 TSPAN11A1L157 253 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 CFAP69A5D8W1 941 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 KPNA3O00505 521 aaPredicted RBP13.18□□□□□ -0.3
RAB5C-206ENST00000550406 HTRA2O43464 458 aaPredicted RBP13.18□□□□□ -0.3
RAB5C-206ENST00000550406 RNASEH1O60930 286 aaKnown RBP13.18□□□□□ -0.3
RAB5C-206ENST00000550406 ADH1BP00325 375 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 PRLP01236 227 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 IGLV3-19P01714 112 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 DNTTP04053 509 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 TUBB4AP04350 444 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 TIMP2P16035 220 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 ITIH2P19823 946 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 COILP38432 576 aaPredicted RBP13.18□□□□□ -0.3
RAB5C-206ENST00000550406 CD86P42081 329 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 TAS2R38P59533 333 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 ZBTB16Q05516 673 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 RAD51Q06609 339 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 TCF15Q12870 199 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 ZNF805Q5CZA5 627 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 RALGPS1Q5JS13 557 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 PIP5KL1Q5T9C9 394 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 DSG4Q86SJ6 1040 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 LONP2Q86WA8 852 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 HDDC3Q8N4P3 179 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 MAGOHBQ96A72 148 aaKnown RBP13.18□□□□□ -0.3
RAB5C-206ENST00000550406 ECHDC3Q96DC8 303 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 SPATA13Q96N96 652 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 FCRL5Q96RD9 977 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 TUBGCP5Q96RT8 1024 aa13.18□□□□□ -0.3
RAB5C-206ENST00000550406 RBM15Q96T37 977 aaKnown RBP eCLIP13.18□□□□□ -0.3
RAB5C-206ENST00000550406 NAP1L3Q99457 506 aaPredicted RBP13.18□□□□□ -0.3
RAB5C-206ENST00000550406 NEUROG2Q9H2A3 272 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms