RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 UBR7Q8N806 425 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 CXorf38Q8TB03 319 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 DQX1Q8TE96 717 aaKnown RBP14.32□□□□□ -0.12
CACNB3-209ENST00000548860 CCDC138Q96M89 665 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 OLFM3Q96PB7 478 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 IL22Q9GZX6 179 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 AAR2Q9Y312 384 aaKnown RBP14.32□□□□□ -0.12
CACNB3-209ENST00000548860 ANKRD31Q8N7Z5 1873 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 DOCK5Q9H7D0 1870 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 SOCS7O14512 581 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 E2F6O75461 281 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 AP2A1O95782 977 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 SNAI1O95863 264 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-209ENST00000548860 UGT1A6P19224 532 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 OR1E1P30953 314 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 PTPN9P43378 593 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 GSSP48637 474 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 LAMB3Q13751 1172 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 SLC5A9Q2M3M2 681 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 DUSP28Q4G0W2 176 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 ZNF410Q86VK4 478 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 TBATAQ96M53 351 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 ADAMTS5Q9UNA0 930 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 GNEQ9Y223 722 aaKnown RBP14.32□□□□□ -0.12
CACNB3-209ENST00000548860 LRRC14BA6NHZ5 514 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 RPL10P27635 214 aaKnown RBP14.32□□□□□ -0.12
CACNB3-209ENST00000548860 NRG1Q02297 640 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-209ENST00000548860 GK3PQ14409 553 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 NEDD8Q15843 81 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 FSCN1Q16658 493 aaKnown RBP14.32□□□□□ -0.12
CACNB3-209ENST00000548860 TIGD5Q53EQ6 642 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 ANGPTL8Q6UXH0 198 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 LRRC52Q8N7C0 313 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 MZB1Q8WU39 189 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 SMARCD1Q96GM5 515 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 MAML3Q96JK9 1138 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 CATSPERBQ9H7T0 1116 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 SSU72Q9NP77 194 aaKnown RBP14.32□□□□□ -0.12
CACNB3-209ENST00000548860 UXTQ9UBK9 157 aaPredicted RBP14.32□□□□□ -0.12
CACNB3-209ENST00000548860 ZMYM5Q9UJ78 669 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 NME7Q9Y5B8 376 aa14.32□□□□□ -0.12
CACNB3-209ENST00000548860 HACD1B0YJ81 288 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 MAGEC1O60732 1142 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 GPR15P49685 360 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 RAB10P61026 200 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 KCTD21Q4G0X4 260 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 TBCELQ5QJ74 424 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 PTGR2Q8N8N7 351 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-209ENST00000548860 LRTOMTQ8WZ04 291 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 CRTAC1Q9NQ79 661 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 FAM105AQ9NUU6 356 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 PDLIM1O00151 329 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 MPOP05164 745 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 ZNF23P17027 643 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 PPIL2Q13356 520 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 VPS26BQ4G0F5 336 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 LIPMQ5VYY2 423 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 MARK2Q7KZI7 788 aaKnown RBP14.31□□□□□ -0.12
CACNB3-209ENST00000548860 EGFL6Q8IUX8 553 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 FBXO32Q969P5 355 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 SMOQ99835 787 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 SLC39A8Q9C0K1 460 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 SPON1Q9HCB6 807 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 MTMR10Q9NXD2 777 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 GMPR2Q9P2T1 348 aaKnown RBP14.31□□□□□ -0.12
CACNB3-209ENST00000548860 FOXD2O60548 495 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-209ENST00000548860 ODC1P11926 461 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 PROZP22891 400 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 SLC1A2P43004 574 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 DAOAP59103 153 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 TBCCQ15814 346 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 TTC33Q6PID6 262 aaPredicted RBP14.31□□□□□ -0.12
CACNB3-209ENST00000548860 ZNF534Q76KX8 674 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 KBTBD7Q8WVZ9 684 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 MTFMTQ96DP5 389 aaKnown RBP14.31□□□□□ -0.12
CACNB3-209ENST00000548860 SEMA3CQ99985 751 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 TBCDQ9BTW9 1192 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 CCDC106Q9BWC9 280 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 EMCNQ9ULC0 261 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 RAP2CQ9Y3L5 183 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 NRCAMQ92823 1304 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 HNRNPRO43390 633 aaKnown RBP14.31□□□□□ -0.12
CACNB3-209ENST00000548860 NCK1P16333 377 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 GEMP55040 296 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 INCA1Q0VD86 236 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 PLCL1Q15111 1095 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 ZNF789Q5FWF6 425 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 TAPT1Q6NXT6 567 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 LINC00523Q86TU6 105 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 CLEC4FQ8N1N0 589 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 LATS2Q9NRM7 1088 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 PCDH10Q9P2E7 1040 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 RNF112Q9ULX5 631 aa14.31□□□□□ -0.12
CACNB3-209ENST00000548860 IGKV6-21A0A0C4DH24 114 aa14.3□□□□□ -0.12
CACNB3-209ENST00000548860 DLX3O60479 287 aa14.3□□□□□ -0.12
CACNB3-209ENST00000548860 F9P00740 461 aa14.3□□□□□ -0.12
CACNB3-209ENST00000548860 HNRNPCP07910 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
CACNB3-209ENST00000548860 EDNRBP24530 442 aa14.3□□□□□ -0.12
CACNB3-209ENST00000548860 CHN2P52757 468 aa14.3□□□□□ -0.12
CACNB3-209ENST00000548860 LIN52Q52LA3 116 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms