RNA–Protein interactions for RNA: ENST00000548473.1

AC007540.1-201, humanhuman

TSL 3 BASIC

Gene AC007540.1, Length 507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007540.1-201ENST00000548473 PRAMEF14Q5SWL7 426 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 SEL1L3Q68CR1 1132 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 NAPEPLDQ6IQ20 393 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 NEK5Q6P3R8 708 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 TTC7BQ86TV6 843 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 HORMAD1Q86X24 394 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 RHOT2Q8IXI1 618 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 TSEN2Q8NCE0 465 aaKnown RBP12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 FAM71BQ8TC56 605 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 RFFLQ8WZ73 363 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 SKA1Q96BD8 255 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 FEM1CQ96JP0 617 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 MYOCQ99972 504 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 OSBPL1AQ9BXW6 950 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 RCOR3Q9P2K3 495 aaPredicted RBP12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 INTUQ9ULD6 942 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 ZFR2Q9UPR6 939 aaKnown RBP12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 CA5BQ9Y2D0 317 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 FNDC3AQ9Y2H6 1198 aaKnown RBP12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 FADS3Q9Y5Q0 445 aa12.13□□□□□ -0.47
AC007540.1-201ENST00000548473 TLR4O00206 839 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 NEMP1O14524 444 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 SH3BP5O60239 455 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 MTA2O94776 668 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 PIGNO95427 931 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 ITIH2P19823 946 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 CSRP1P21291 193 aaKnown RBP12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 SERPINB6P35237 376 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 CYLC1P35663 651 aaPredicted RBP12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 NUDT1P36639 197 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 ARHGAP25P42331 645 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 CTSKP43235 329 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 NOP2P46087 812 aaKnown RBP12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 FOXK2Q01167 660 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 STAT4Q14765 748 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 PDK2Q15119 407 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 SPA17Q15506 151 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 SLC45A4Q5BKX6 768 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 LRRC73Q5JTD7 316 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 PIP4P1Q86T03 277 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 SRLQ86TD4 932 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 MAP7D3Q8IWC1 876 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 CCDC170Q8IYT3 715 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 PCDH19Q8TAB3 1148 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 RAPGEF5Q92565 580 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 CAMK1GQ96NX5 476 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 CINPQ9BW66 212 aaPredicted RBP12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 CPEB1Q9BZB8 566 aaKnown RBP12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 SLC32A1Q9H598 525 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 FZD3Q9NPG1 666 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 TM7SF3Q9NS93 570 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 GGT7Q9UJ14 662 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 TFR2Q9UP52 801 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 DMTF1Q9Y222 760 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 ITM2BQ9Y287 266 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 HYOU1Q9Y4L1 999 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 PCDHA13Q9Y5I0 950 aa12.12□□□□□ -0.47
AC007540.1-201ENST00000548473 NCOR2Q9Y618 2525 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 PLXNA2O75051 1894 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 TTC24A2A3L6 582 aaPredicted RBP12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 UPK3BL1B0FP48 263 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 UPK3BL2E5RIL1 263 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 PRAMEF26H0Y7S4 382 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 H0Y8X5 98 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 MUSKO15146 869 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 AP1G1O43747 822 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 BUB1BO60566 1050 aaPredicted RBP12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 MAP3K6O95382 1288 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 PAK4O96013 591 aaPredicted RBP12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 CEACAM1P13688 526 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 TNNT1P13805 278 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 TIMP2P16035 220 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 KDELR1P24390 212 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 RPS21P63220 83 aaKnown RBP12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 SLC10A7Q0GE19 358 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 SLC14A1Q13336 389 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 RFTN1Q14699 578 aaPredicted RBP12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 LBRQ14739 615 aaKnown RBP12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 TCEAL1Q15170 157 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 TMEM259Q4ZIN3 620 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 ANKRD20A8PQ5CZ79 823 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 N4BP2L1Q5TBK1 243 aaPredicted RBP12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 TMCO4Q5TGY1 634 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 CAMK1DQ8IU85 385 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 ATPAF2Q8N5M1 289 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 MFSD2AQ8NA29 543 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 RAB7BQ96AH8 199 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 ZNF599Q96NL3 588 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 PANX2Q96RD6 677 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 ZNF670Q9BS34 389 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 SLC17A9Q9BYT1 436 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 SUV39H2Q9H5I1 410 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 DKK3Q9UBP4 350 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 SEPT3Q9UH03 358 aa12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 EPN1Q9Y6I3 576 aaPredicted RBP12.11□□□□□ -0.47
AC007540.1-201ENST00000548473 DOCK9Q9BZ29 2069 aa12.1□□□□□ -0.47
AC007540.1-201ENST00000548473 LRRD1A4D1F6 860 aa12.1□□□□□ -0.47
AC007540.1-201ENST00000548473 IGLON5A6NGN9 336 aa12.1□□□□□ -0.47
AC007540.1-201ENST00000548473 SOWAHDA6NJG2 315 aa12.1□□□□□ -0.47
AC007540.1-201ENST00000548473 SPINT1O43278 529 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms